RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 TRAV38-1A0A0B4J264 116 aa12.52□□□□□ -0.4
SRPRA-206ENST00000532259 EIF3GO75821 320 aaKnown RBP eCLIP12.52□□□□□ -0.4
SRPRA-206ENST00000532259 OR9G9P0C7N8 305 aa12.52□□□□□ -0.4
SRPRA-206ENST00000532259 RPL31P62899 125 aaKnown RBP12.52□□□□□ -0.4
SRPRA-206ENST00000532259 BAXQ07812 192 aa12.52□□□□□ -0.4
SRPRA-206ENST00000532259 ATP5SQ99766 215 aa12.52□□□□□ -0.4
SRPRA-206ENST00000532259 NKX6-3A6NJ46 265 aa12.52□□□□□ -0.41
SRPRA-206ENST00000532259 P0C879 139 aa12.52□□□□□ -0.41
SRPRA-206ENST00000532259 MMP9P14780 707 aa12.52□□□□□ -0.41
SRPRA-206ENST00000532259 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.41
SRPRA-206ENST00000532259 MSMO1Q15800 293 aa12.52□□□□□ -0.41
SRPRA-206ENST00000532259 LILRB2Q8N423 598 aa12.52□□□□□ -0.41
SRPRA-206ENST00000532259 TSNAXQ99598 290 aaKnown RBP12.52□□□□□ -0.41
SRPRA-206ENST00000532259 QTRT1Q9BXR0 403 aaKnown RBP12.52□□□□□ -0.41
SRPRA-206ENST00000532259 TNCP24821 2201 aa12.52□□□□□ -0.41
SRPRA-206ENST00000532259 TRAV3A0A0B4J244 114 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 LY6HO94772 140 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 IL34Q6ZMJ4 242 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 DIRC2Q96SL1 478 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.51□□□□□ -0.41
SRPRA-206ENST00000532259 UQCC1Q9NVA1 299 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 CSMD1Q96PZ7 3565 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 MALRD1Q5VYJ5 2156 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 PIGBOS1A0A0B4J2F0 54 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 CEBPZOSA8MTT3 80 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 APOBEC3AP31941 199 aaPredicted RBP12.51□□□□□ -0.41
SRPRA-206ENST00000532259 UQCC3Q6UW78 93 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 S1PR3Q99500 378 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 PRORYQ9H606 182 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 CTSZQ9UBR2 303 aa12.51□□□□□ -0.41
SRPRA-206ENST00000532259 RNASEK-C17orf49H0YIS7 233 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 TSPAN4O14817 238 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 IFNA17P01571 189 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 DLX1P56177 255 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 C1orf87Q8N0U7 546 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 HSPB7Q9UBY9 170 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 CCL20P78556 96 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 MRPS11P82912 194 aaKnown RBP12.5□□□□□ -0.41
SRPRA-206ENST00000532259 MUC15Q8N387 334 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 DTD1Q8TEA8 209 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 OR4C12Q96R67 309 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 EIF5A2Q9GZV4 153 aaKnown RBP12.5□□□□□ -0.41
SRPRA-206ENST00000532259 TET2Q6N021 2002 aaPredicted RBP12.5□□□□□ -0.41
SRPRA-206ENST00000532259 MED13LQ71F56 2210 aa12.5□□□□□ -0.41
SRPRA-206ENST00000532259 UBE2L5PA0A1B0GUS4 154 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 hADV38S2A0JD32 116 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 ATG12O94817 140 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 IFNA5P01569 189 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 SFTA3P0C7M3 94 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 PPT1P50897 306 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 FBXL19-AS1Q494R0 122 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 AKIRIN2Q53H80 203 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 MS4A5Q9H3V2 200 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 IGHV1-69-2A0A0G2JMI3 117 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 DVL1O14640 695 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 REG1BP48304 166 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 TMEM200BQ69YZ2 307 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 ZNF525Q8N782 197 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 COA4Q9NYJ1 87 aa12.49□□□□□ -0.41
SRPRA-206ENST00000532259 RAB29O14966 203 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 UQCRFS1P47985 274 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 TMEM88Q6PEY1 159 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 PUSL1Q8N0Z8 303 aaKnown RBP12.48□□□□□ -0.41
SRPRA-206ENST00000532259 ZNF251Q9BRH9 671 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 PRELID3BQ9Y3B1 194 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 ZFYVE26Q68DK2 2539 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 TMEM8BA6NDV4 472 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 FAM74A7A6NL05 159 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 ZNF729A6NN14 1252 aaPredicted RBP12.48□□□□□ -0.41
SRPRA-206ENST00000532259 HPRT1P00492 218 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 MYOD1P15172 320 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 COL8A2P25067 703 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 SNCAP37840 140 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 SLC38A11Q08AI6 406 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 FAM74A3Q4VXF1 159 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 AKR1C8PQ5T2L2 129 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 SSX8Q7RTT4 187 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 ZNF383Q8NA42 475 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 ZNF439Q8NDP4 499 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 SCGB1C1Q8TD33 95 aa12.48□□□□□ -0.41
SRPRA-206ENST00000532259 ARHGAP32A7KAX9 2087 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 NDUFB3O43676 98 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 DFFBO76075 338 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 RAB7AP51149 207 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 ELLP55199 621 aaPredicted RBP12.47□□□□□ -0.41
SRPRA-206ENST00000532259 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 CD300LFQ8TDQ1 290 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 RARRES2Q99969 163 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
SRPRA-206ENST00000532259 RPUSD1Q9UJJ7 312 aaKnown RBP12.47□□□□□ -0.41
SRPRA-206ENST00000532259 B9A039 149 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 TNFRSF13BO14836 293 aaPredicted RBP12.47□□□□□ -0.41
SRPRA-206ENST00000532259 OPN1MWP04001 364 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 OPN1MW2P0DN77 364 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 OPN1MW3P0DN78 364 aa12.47□□□□□ -0.41
SRPRA-206ENST00000532259 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
SRPRA-206ENST00000532259 TAS2R30P59541 319 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms