RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 LINC00311Q8N616 119 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 ZBTB34Q8NCN2 500 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 OR51H1Q8NH63 302 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 UNKLQ9H9P5 680 aaKnown RBP11.35□□□□□ -0.59
NXF1-207ENST00000530875 HIF1ANQ9NWT6 349 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
NXF1-207ENST00000530875 CCDC168Q8NDH2 2452 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 OR5AC1P0C628 307 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 PET100P0DJ07 73 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 PRRX1P54821 245 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 LINC00205P59089 165 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
NXF1-207ENST00000530875 TMEM187Q14656 261 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 TMEM249Q2WGJ8 235 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 LRRC20Q8TCA0 184 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 TMEM186Q96B77 213 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 MSI2Q96DH6 328 aaKnown RBP11.35□□□□□ -0.59
NXF1-207ENST00000530875 ZNF251Q9BRH9 671 aa11.35□□□□□ -0.59
NXF1-207ENST00000530875 TRAV20A0A0B4J274 112 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 C3orf85A0A1B0GTC6 90 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 RNASEK-C17orf49H0YIS7 233 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 TEX46H3BTG2 121 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 M0R1X1 148 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 IGLV1-47P01700 117 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 IGHV4-31P0DP07 118 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 ZNF16P17020 682 aaPredicted RBP11.34□□□□□ -0.59
NXF1-207ENST00000530875 HOXB4P17483 251 aaPredicted RBP11.34□□□□□ -0.59
NXF1-207ENST00000530875 RPL30P62888 115 aaKnown RBP11.34□□□□□ -0.59
NXF1-207ENST00000530875 HLA-DRB5Q30154 266 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 FOXRED2Q8IWF2 684 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 CIARTQ8N365 385 aaPredicted RBP11.34□□□□□ -0.59
NXF1-207ENST00000530875 OR11H6Q8NGC7 330 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 PHYHIPLQ96FC7 376 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 GALNT14Q96FL9 552 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 TP53RKQ96S44 253 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 GAB2Q9UQC2 676 aa11.34□□□□□ -0.59
NXF1-207ENST00000530875 A0A1W2PRD5 423 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 A0A1W2PRF3 423 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 A0A1W2PRM7 423 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 MSGN1A6NI15 193 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 SHOXO15266 292 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 TGFAP01135 160 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 ARG1P05089 322 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 F2RP25116 425 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 DIAPH2-AS1Q14236 149 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.33□□□□□ -0.6
NXF1-207ENST00000530875 BEND2Q8NDZ0 799 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 LHX4Q969G2 390 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 LINC00473A8K010 186 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
NXF1-207ENST00000530875 REG1BP48304 166 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 NCR3LG1Q68D85 454 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 ZNF833PQ6ZTB9 187 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 OR4P4Q8NGL7 312 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 AQP10Q96PS8 301 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 S1PR3Q99500 378 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 C7orf69Q9H7B7 122 aa11.33□□□□□ -0.6
NXF1-207ENST00000530875 RNF212BA8MTL3 300 aa11.32□□□□□ -0.6
NXF1-207ENST00000530875 BUB1B-PAK6H3BSN5 160 aa11.32□□□□□ -0.6
NXF1-207ENST00000530875 SMAD7O15105 426 aaKnown RBP11.32□□□□□ -0.6
NXF1-207ENST00000530875 OR2B11Q5JQS5 317 aa11.32□□□□□ -0.6
NXF1-207ENST00000530875 ZNF66Q6ZN08 573 aa11.32□□□□□ -0.6
NXF1-207ENST00000530875 STOML3Q8TAV4 291 aa11.32□□□□□ -0.6
NXF1-207ENST00000530875 GLYATL2Q8WU03 294 aa11.32□□□□□ -0.6
NXF1-207ENST00000530875 TCTEX1D2Q8WW35 142 aa11.32□□□□□ -0.6
NXF1-207ENST00000530875 HSD17B10Q99714 261 aaKnown RBP11.32□□□□□ -0.6
NXF1-207ENST00000530875 CYTL1Q9NRR1 136 aa11.32□□□□□ -0.6
NXF1-207ENST00000530875 ODF3BA8MYP8 253 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 H0Y980 276 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 SCGB1D2O95969 90 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
NXF1-207ENST00000530875 GATA3P23771 443 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 IL3RAP26951 378 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 ZNF137PP52743 207 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 CATR1Q13166 79 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 SMCO1Q147U7 214 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 LGI3Q8N145 548 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 LRTM2Q8N967 370 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 C18orf12Q96KH6 178 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 TMEM222Q9H0R3 208 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 LIN7CQ9NUP9 197 aaKnown RBP11.31□□□□□ -0.6
NXF1-207ENST00000530875 LSM5Q9Y4Y9 91 aaKnown RBP11.31□□□□□ -0.6
NXF1-207ENST00000530875 CR1P17927 2039 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 CT45A6P0DMU7 189 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 CT45A5P0DMU8 189 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 CT45A7P0DMV0 189 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 LDLRAD2Q5SZI1 272 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 LYZL2Q7Z4W2 148 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 HSD17B13Q7Z5P4 300 aaPredicted RBP11.31□□□□□ -0.6
NXF1-207ENST00000530875 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
NXF1-207ENST00000530875 ZC4H2Q9NQZ6 224 aa11.31□□□□□ -0.6
NXF1-207ENST00000530875 AMMECR1Q9Y4X0 333 aaPredicted RBP11.31□□□□□ -0.6
NXF1-207ENST00000530875 ITPR3Q14573 2671 aa11.3□□□□□ -0.6
NXF1-207ENST00000530875 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
NXF1-207ENST00000530875 RAMP3O60896 148 aa11.3□□□□□ -0.6
NXF1-207ENST00000530875 DEDDO75618 318 aa11.3□□□□□ -0.6
NXF1-207ENST00000530875 CRYZL1O95825 349 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms