RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NHLRC3Q5JS37 347 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 TPTE2P1Q5T6R2 138 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 C12orf73Q69YU5 71 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 C10orf99Q6UWK7 81 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 FAM220AQ7Z4H9 259 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 GVQW1Q8N7I0 195 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 CCDC197Q8NCU1 140 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 OR10H4Q8NGA5 316 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 OR4D6Q8NGJ1 314 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 C10orf35Q96D05 121 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 IL4I1Q96RQ9 567 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 S1PR3Q99500 378 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 B9D2Q9BPU9 175 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 ZNF286AQ9HBT8 521 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 HMG20AQ9NP66 347 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 TAS2R3Q9NYW6 316 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 WARS2Q9UGM6 360 aaKnown RBP5.02□□□□□ -1.61
CSDE1-213ENST00000530784 MGAT4AQ9UM21 535 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 GSTK1Q9Y2Q3 226 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 HSPE1-MOB4S4R3N1 261 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 PLXNB1O43157 2135 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 IGKV1-9A0A0C4DH69 117 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 TCRBV3S1A0A5B6 114 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 ODAMA1E959 279 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 OOSP1A8MZH6 123 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 BUB1B-PAK6H3BSN5 160 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 ZNF44P15621 663 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 ATF1P18846 271 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 PRKACBP22694 351 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 CD34P28906 385 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 HTR1FP30939 366 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 ATP6V1E1P36543 226 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 OR3A4PP47883 348 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 PRRX1P54821 245 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 AESQ08117 197 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 ATAD3CQ5T2N8 411 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 CHST4Q8NCG5 386 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 RPEQ96AT9 228 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 ADAT3Q96EY9 351 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-213ENST00000530784 OPALINQ96PE5 141 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 SPAG8Q99932 426 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-213ENST00000530784 NEK6Q9HC98 313 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 ENOPH1Q9UHY7 261 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 GNG8Q9UK08 70 aa5.01□□□□□ -1.61
CSDE1-213ENST00000530784 AMMECR1Q9Y4X0 333 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-213ENST00000530784 IGKV1-12A0A0C4DH73 117 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 ZNF729A6NN14 1252 aaPredicted RBP5□□□□□ -1.61
CSDE1-213ENST00000530784 G3V2T6 193 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 LY6LH3BQJ8 138 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 GYG2O15488 501 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 IGKV1D-12P01611 117 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 CSN2P05814 226 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 CCDC159P0C7I6 412 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 NFYBP25208 207 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 SLC6A1P30531 599 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 MYCNOSP40205 109 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 GLP1RP43220 463 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 KIR3DL2P43630 455 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 RPL23AP62750 156 aaKnown RBP5□□□□□ -1.61
CSDE1-213ENST00000530784 SLC35B1P78383 322 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 BNIP1Q12981 228 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 PDZK1IP1Q13113 114 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 HES1Q14469 280 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 ATXN7L3Q14CW9 347 aaPredicted RBP5□□□□□ -1.61
CSDE1-213ENST00000530784 Q1RN00 199 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 TP53I3Q53FA7 332 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 TMEM244Q5VVB8 128 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 UNQ9370/PRO34162Q6UXP9 181 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 UTS2BQ765I0 119 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 OR2W3Q7Z3T1 314 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 RDH10Q8IZV5 341 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 OR5D18Q8NGL1 313 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 OR13C9Q8NGT0 318 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 OR56B4Q8NH76 319 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 OR9G1Q8NH87 305 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 FGGYQ96C11 551 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 COMMD4Q9H0A8 199 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 RHOFQ9HBH0 211 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 ZMAT5Q9UDW3 170 aaKnown RBP5□□□□□ -1.61
CSDE1-213ENST00000530784 PSORS1C1Q9UIG5 152 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 HHLA2Q9UM44 414 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 POMPQ9Y244 141 aa5□□□□□ -1.61
CSDE1-213ENST00000530784 KMT2CQ8NEZ4 4911 aaKnown RBP4.99□□□□□ -1.61
CSDE1-213ENST00000530784 KBTBD11-OT1A0A1B0GTJ5 212 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 TEX48A0A1B0GUV7 120 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 SERPINE3A8MV23 424 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 DEGS1O15121 323 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 FGF16O43320 207 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 ISG15P05161 165 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 ZNF85Q03923 595 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 GABPB1Q06547 395 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-213ENST00000530784 TMED1Q13445 227 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 ATP6AP1Q15904 470 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 KDM4DQ6B0I6 523 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 SLC35E3Q7Z769 313 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 ZNF695Q8IW36 515 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 SAXO1Q8IYX7 474 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 COMMD1Q8N668 190 aa4.99□□□□□ -1.61
CSDE1-213ENST00000530784 C5orf56Q8N8D9 126 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms