RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 PRDM13Q9H4Q3 707 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 GFOD1Q9NXC2 390 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 CDIPTO14735 213 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 GPX4P36969 197 aaPredicted RBP12.14□□□□□ -0.47
NR1H3-231ENST00000529540 CCL8P80075 99 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 DEFA6Q01524 100 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 C9orf152Q5JTZ5 239 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 FAM90A2PQ658T7 463 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 ZNF818PQ6ZRF7 136 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 WDR86Q86TI4 376 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 GAPTQ8N292 157 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 GTF3AQ92664 365 aaKnown RBP12.14□□□□□ -0.47
NR1H3-231ENST00000529540 CCL19Q99731 98 aa12.14□□□□□ -0.47
NR1H3-231ENST00000529540 RAI1Q7Z5J4 1906 aaPredicted RBP12.14□□□□□ -0.47
NR1H3-231ENST00000529540 KIR2DS1A0A191URI9 304 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 CST7O76096 145 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
NR1H3-231ENST00000529540 CYB5R3P00387 301 aaPredicted RBP12.13□□□□□ -0.47
NR1H3-231ENST00000529540 IFNA10P01566 189 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 KIR2DS4P43632 304 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 RUNX1Q01196 453 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 KIR2DS1Q14954 304 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 SPIN3Q5JUX0 258 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 WDR82Q6UXN9 313 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 STX12Q86Y82 276 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 A0A1B0GU03 582 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 PHOX2AO14813 284 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 CYB5BO43169 146 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 CHST1O43916 411 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 IFNA5P01569 189 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 PGA5P0DJD9 388 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 SSTP61278 116 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 FGF12P61328 243 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 MPV17LQ2QL34 196 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 PRAMEF6Q5VXH4 476 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 LINC00596Q86U02 117 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 FAM90A1Q86YD7 464 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 P2RX4Q99571 388 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
NR1H3-231ENST00000529540 RNF7Q9UBF6 113 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 RNF150Q9ULK6 438 aa12.13□□□□□ -0.47
NR1H3-231ENST00000529540 ABCA4P78363 2273 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 TRBV24-1A0A075B6N3 115 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 TRBV6-6A0A0A6YYG2 114 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 IGKV1D-13A0A0B4J2D9 117 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 IGHV1-69-2A0A0G2JMI3 117 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 CLDN34H7C241 214 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 OVOL3O00110 214 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 TRGC2P03986 189 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 IGKV1-13P0DP09 117 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 BCL2P10415 239 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 COL8A1P27658 744 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 CEBPGP53567 150 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 PMS2P11Q13670 270 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 HERPUD1Q15011 391 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 PDCD1Q15116 288 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 SMIM21Q3B7S5 101 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 ZNF787Q6DD87 383 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 MOGAT3Q86VF5 341 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
NR1H3-231ENST00000529540 CTDSP1Q9GZU7 261 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 UFSP2Q9NUQ7 469 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 HELZ2Q9BYK8 2649 aaKnown RBP12.12□□□□□ -0.47
NR1H3-231ENST00000529540 PKDREJQ9NTG1 2253 aa12.12□□□□□ -0.47
NR1H3-231ENST00000529540 SYNGR1O43759 233 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 NXPH2O95156 264 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 CDPF1Q6NVV7 123 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 C11orf53Q8IXP5 236 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 ZCCHC24Q8N2G6 241 aaKnown RBP12.11□□□□□ -0.47
NR1H3-231ENST00000529540 TMEM217Q8N7C4 229 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 LRRC29Q8WV35 223 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 RDH5Q92781 318 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 RIMS4Q9H426 269 aaPredicted RBP12.11□□□□□ -0.47
NR1H3-231ENST00000529540 CCL28Q9NRJ3 127 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 URGCP-MRPS24S4R325 110 aa12.11□□□□□ -0.47
NR1H3-231ENST00000529540 SPTAN1Q13813 2472 aaKnown RBP12.11□□□□□ -0.47
NR1H3-231ENST00000529540 KIAA1324LA8MWY0 1029 aaPredicted RBP12.1□□□□□ -0.47
NR1H3-231ENST00000529540 SRRM5B3KS81 715 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 PGLYRP1O75594 196 aaPredicted RBP12.1□□□□□ -0.47
NR1H3-231ENST00000529540 RHBDL1O75783 438 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 FSTL3O95633 263 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 OPN1MWP04001 364 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 SCTP09683 121 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 OPN1MW2P0DN77 364 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 OPN1MW3P0DN78 364 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 PAX1P15863 534 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 BCL3P20749 454 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 S100GP29377 79 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 EFNA4P52798 201 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 ERVK11-1P61568 191 aa12.1□□□□□ -0.47
NR1H3-231ENST00000529540 PKIAP61925 76 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms