RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ATG5Q9H1Y0 275 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 SCPEP1Q9HB40 452 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 Q9N2K0 584 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.07□□□□□ -0.64
CAPN1-212ENST00000527887 PARP11Q9NR21 331 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 TAS2R8Q9NYW2 309 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 RNF150Q9ULK6 438 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 WASHC3Q9Y3C0 194 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 WSB1Q9Y6I7 421 aa11.07□□□□□ -0.64
CAPN1-212ENST00000527887 TENM3Q9P273 2699 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 H0YJW9 148 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 I3L521 148 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 RRHO14718 337 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 NHLRC4P0CG21 123 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-212ENST00000527887 GSTT2BP0CG30 244 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 CNTFRP26992 372 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 RAB9AP51151 201 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 TMEM50BP56557 158 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 TAS2R20P59543 309 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 AP3S2P59780 193 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 DYRK1AQ13627 763 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 KIAA0141Q14154 515 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-212ENST00000527887 OXA1LQ15070 435 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 DEFB136Q30KP8 78 aa11.06□□□□□ -0.64
CAPN1-212ENST00000527887 CMSS1Q9BQ75 279 aaKnown RBP11.06□□□□□ -0.64
CAPN1-212ENST00000527887 C7orf50Q9BRJ6 194 aaKnown RBP11.06□□□□□ -0.64
CAPN1-212ENST00000527887 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-212ENST00000527887 RBMX2Q9Y388 322 aaKnown RBP11.06□□□□□ -0.64
CAPN1-212ENST00000527887 SEC14L6B5MCN3 397 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 TRDCB7Z8K6 153 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 G3V318 75 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 RAB27BO00194 218 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 DIRAS3O95661 229 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 VEGFCP49767 419 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 CX3CL1P78423 397 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 MRPS15P82914 257 aaKnown RBP11.05□□□□□ -0.64
CAPN1-212ENST00000527887 ZNF616Q08AN1 781 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 PLGLAQ15195 96 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 RPL39P5Q59GN2 51 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 ZNF562Q6V9R5 426 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-212ENST00000527887 OR1N2Q8NGR9 330 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 TRIM63Q969Q1 353 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 ARHGAP5-AS1Q96IT6 56 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 TSNAXQ99598 290 aaKnown RBP11.05□□□□□ -0.64
CAPN1-212ENST00000527887 PECRQ9BY49 303 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 TOLLIPQ9H0E2 274 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 KLK15Q9H2R5 256 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 KCNK15Q9H427 330 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 ZNF221Q9UK13 617 aa11.05□□□□□ -0.64
CAPN1-212ENST00000527887 MRPS7Q9Y2R9 242 aaKnown RBP11.05□□□□□ -0.64
CAPN1-212ENST00000527887 DNAH9Q9NYC9 4486 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 H7C2Y5 167 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 ARPC1BO15143 372 aaKnown RBP11.04□□□□□ -0.64
CAPN1-212ENST00000527887 SPDEFO95238 335 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 SCTP09683 121 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 PRSS3P35030 304 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 INPP1P49441 399 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 AKIRIN2Q53H80 203 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 MZT2BQ6NZ67 158 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 POC5Q8NA72 575 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 OR4A4PQ8NGN8 299 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 OR10R2Q8NGX6 335 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 ABHD14BQ96IU4 210 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 AUNIPQ9H7T9 357 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 MTFP1Q9UDX5 166 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 GAB2Q9UQC2 676 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 FOXA2Q9Y261 457 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-212ENST00000527887 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
CAPN1-212ENST00000527887 TRAV18A0A075B6X5 111 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 CENPXA8MT69 81 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 LUMP51884 338 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-212ENST00000527887 TAGLNQ01995 201 aaKnown RBP11.03□□□□□ -0.64
CAPN1-212ENST00000527887 PLA2G7Q13093 441 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 TRIM16LQ309B1 348 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 ZNF260Q3ZCT1 412 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 C19orf54Q5BKX5 351 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 Q6ZNX1 250 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 GPX8Q8TED1 209 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 RBMXL1Q96E39 390 aaKnown RBP11.03□□□□□ -0.64
CAPN1-212ENST00000527887 HDHD3Q9BSH5 251 aaPredicted RBP11.03□□□□□ -0.64
CAPN1-212ENST00000527887 FBXL15Q9H469 300 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 GNB4Q9HAV0 340 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 OR1A1Q9P1Q5 309 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 TBC1D24Q9ULP9 559 aa11.03□□□□□ -0.64
CAPN1-212ENST00000527887 LSM4Q9Y4Z0 139 aaKnown RBP11.03□□□□□ -0.64
CAPN1-212ENST00000527887 A0A1W2PN81 502 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 NAP1L6A6NFF2 107 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 PLA2G10O15496 165 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 APOA2P02652 100 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 CD3GP09693 182 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 CHRNA7P36544 502 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 ECI1P42126 302 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 CBX5P45973 191 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 PSG5Q15238 335 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 SRSF7Q16629 238 aaKnown RBP eCLIP11.02□□□□□ -0.65
CAPN1-212ENST00000527887 PLAC9Q5JTB6 97 aa11.02□□□□□ -0.65
CAPN1-212ENST00000527887 GLDNQ6ZMI3 551 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms