RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 WDR73Q6P4I2 378 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 PARM1Q6UWI2 310 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 ZNF430Q9H8G1 570 aaPredicted RBP10.54□□□□□ -0.72
TSKU-203ENST00000527881 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 SZT2Q5T011 3432 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 VASH2Q86V25 355 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 SMIM12Q96EX1 92 aa10.54□□□□□ -0.72
TSKU-203ENST00000527881 SPEGQ15772 3267 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 TRAV9-2A0A087WT02 112 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 TNFRSF4P43489 277 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 MORN2Q502X0 79 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 PCSK4Q6UW60 755 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 C19orf35Q6ZS72 473 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 DEPPQ9NTK1 212 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 FAM186AA6NE01 2351 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 ATG2AQ2TAZ0 1938 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 H0Y8G0 127 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 M0R1X1 148 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 RNPS1Q15287 305 aaKnown RBP10.53□□□□□ -0.72
TSKU-203ENST00000527881 FAM27BQ5VT28 67 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 S100A7AQ86SG5 101 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 DOLPP1Q86YN1 238 aa10.53□□□□□ -0.72
TSKU-203ENST00000527881 SEPSECSQ9HD40 501 aaKnown RBP10.53□□□□□ -0.72
TSKU-203ENST00000527881 URB1O60287 2271 aaKnown RBP10.53□□□□□ -0.72
TSKU-203ENST00000527881 TNFSF11O14788 317 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 MMP23AO75900 390 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 IGHV3-9P01782 118 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 IGLL1P15814 213 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 FGF12P61328 243 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 ZNF585BQ52M93 769 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 C10orf128Q5T292 105 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 WFDC8Q8IUA0 241 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 OR2Y1Q8NGV0 311 aa10.52□□□□□ -0.72
TSKU-203ENST00000527881 hCG_38984A0A1B0GV85 526 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 A0A1B0GX78 115 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 GAGE12BA1L429 117 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 SYNGR3O43761 229 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 TIAF1O95411 115 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 MT-ND6P03923 174 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 CRYGSP22914 178 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 PNKDQ8N490 385 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 OR52L2PQ8NGH6 319 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 TSKUQ8WUA8 353 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 GNB1LQ9BYB4 327 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.52□□□□□ -0.73
TSKU-203ENST00000527881 APCSP02743 223 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 GNG4P50150 75 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 PSG7Q13046 419 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 Q5PR19 223 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 C9orf135Q5VTT2 229 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 MRPL21Q7Z2W9 205 aaKnown RBP10.52□□□□□ -0.73
TSKU-203ENST00000527881 SSMEM1Q8WWF3 244 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 AP1S3Q96PC3 154 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 RNASE7Q9H1E1 156 aaKnown RBP10.52□□□□□ -0.73
TSKU-203ENST00000527881 UBE2ZQ9H832 354 aaPredicted RBP10.52□□□□□ -0.73
TSKU-203ENST00000527881 ZNF331Q9NQX6 463 aaPredicted RBP10.52□□□□□ -0.73
TSKU-203ENST00000527881 HS3ST3A1Q9Y663 406 aa10.52□□□□□ -0.73
TSKU-203ENST00000527881 K7EN84 100 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 SYNGR1O43759 233 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 CCL2P13500 99 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 KIAA0895LQ68EN5 471 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 ZIC4Q8N9L1 334 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 ZC2HC1AQ96GY0 325 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 CRIM1Q9NZV1 1036 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 C2orf16Q68DN1 1984 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 KNTC1P50748 2209 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 USF3Q68DE3 2245 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 TRBV9A0A0B4J1U6 114 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 OR10J3Q5JRS4 329 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 TMEM42Q69YG0 159 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 H2BFWTQ7Z2G1 175 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 TSTD1Q8NFU3 115 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 IFI44Q8TCB0 444 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 OR2D2Q9H210 308 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 TRAV9-1A0A075B6T8 112 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 MUC21A0A0G2JKD1 596 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 MUC21A0A140T8X8 626 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 RAMP3O60896 148 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 CD1BP29016 333 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 MUC21Q5SSG8 566 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 MIC13Q5XKP0 118 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 TMEM92Q6UXU6 159 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 C7orf61Q8IZ16 206 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 ABHD3Q8WU67 409 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 CLEC1BQ9P126 229 aa10.51□□□□□ -0.73
TSKU-203ENST00000527881 COL4A2P08572 1712 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 ABCA7Q8IZY2 2146 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 SAP30O75446 220 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 USF1P22415 310 aaPredicted RBP10.5□□□□□ -0.73
TSKU-203ENST00000527881 CA6P23280 308 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 CA7P43166 264 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 OR1D5P58170 312 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 LRRC10Q5BKY1 277 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 DRAM1Q8N682 238 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 TMEM54Q969K7 222 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 DEFB126Q9BYW3 111 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 IGHV3-64DA0A0J9YX35 117 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 FAM90A26D6RGX4 464 aa10.5□□□□□ -0.73
TSKU-203ENST00000527881 CLDN14O95500 239 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms