RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 FGFRL1Q8N441 504 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 MALSU1Q96EH3 234 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 CLCC1Q96S66 551 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 MAGT1Q9H0U3 335 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 GAL3ST2Q9H3Q3 398 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 LINC00574Q9H8X3 128 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 LYRM2Q9NU23 88 aaPredicted RBP13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 NBASA2RRP1 2371 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 RAI1Q7Z5J4 1906 aaPredicted RBP13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 TNFRSF13BO14836 293 aaPredicted RBP13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 SSSCA1O60232 199 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 RAMP3O60896 148 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 IGKV1-5P01602 117 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 CLINT1Q14677 625 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 OR2B11Q5JQS5 317 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 TCF23Q7RTU1 214 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 CD300LFQ8TDQ1 290 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 ITLN2Q8WWU7 325 aaPredicted RBP13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 BSCL2Q96G97 398 aaPredicted RBP13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 HIPK2Q9H2X6 1198 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 M0R036 132 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 IGHV3-7P01780 117 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 ZNF134P52741 427 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 RAB2AP61019 212 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 NHLH2Q02577 135 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 HSD17B11Q8NBQ5 300 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 ABHD14AQ9BUJ0 271 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 KAAG1Q9UBP8 84 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 CACNG5Q9UF02 275 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 LAMP3Q9UQV4 416 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 MMP24Q9Y5R2 645 aa13.38□□□□□ -0.27
SNRNP35-204ENST00000527158 DIDO1Q9BTC0 2240 aaKnown RBP13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 PKD1L2Q7Z442 2459 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 PCP4L1A6NKN8 68 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 C17orf98A8MV24 154 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 SNRNP70P08621 437 aaKnown RBP13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 SMIM6P0DI80 62 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 MAS1LP35410 378 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 ZNF816Q0VGE8 651 aaPredicted RBP13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 LYPD2Q6UXB3 125 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 RAB1BQ9H0U4 201 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 CBLN4Q9NTU7 201 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 GAB2Q9UQC2 676 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 TPRP12270 2363 aaKnown RBP13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 ARID1AO14497 2285 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 LINC00473A8K010 186 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 UBE2CO00762 179 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 CHST1O43916 411 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 NXPH3O95157 252 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 S100A9P06702 114 aaKnown RBP13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 IZUMO4Q1ZYL8 232 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 Q6ZRM9 215 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 OR10A7Q8NGE5 316 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 OR2G3Q8NGZ4 309 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 FAM213BQ8TBF2 198 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 H1FXQ92522 213 aaKnown RBP13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 LEAP2Q969E1 77 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 IFI27L2Q9H2X8 130 aa13.37□□□□□ -0.27
SNRNP35-204ENST00000527158 ANKHD1Q8IWZ3 2542 aaKnown RBP13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 C5orf52A6NGY3 159 aa13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 M0R1X1 148 aa13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 KRASP01116 189 aa13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 DUTP33316 252 aaKnown RBP13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 CT45A1Q5HYN5 189 aa13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 SOHLH1Q5JUK2 328 aa13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 TMEM182Q6ZP80 229 aaPredicted RBP13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 CT45A3Q8NHU0 189 aa13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 KIAA1456Q9P272 454 aa13.36□□□□□ -0.27
SNRNP35-204ENST00000527158 DVL1O14640 695 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 RAB29O14966 203 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 HBE1P02100 147 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 COL8A2P25067 703 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 BRWD1-AS2P59051 145 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 CLEC9AQ6UXN8 241 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 TMEM252Q8N6L7 170 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 C2CD4CQ8TF44 421 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 ZNF714Q96N38 554 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 SH3BGRL3Q9H299 93 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 METTL1Q9UBP6 276 aaKnown RBP13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 RPUSD1Q9UJJ7 312 aaKnown RBP13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 PKDREJQ9NTG1 2253 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 NBEAQ8NFP9 2946 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 FAM24AA6NFZ4 105 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 SLC31A2O15432 143 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 PROP1O75360 226 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 DFFBO76075 338 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 S1PR2O95136 353 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 RAB5AP20339 215 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 ATP6V0CP27449 155 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 G6PCP35575 357 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 B2MP61769 119 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 AKIRIN2Q53H80 203 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 RPL39P5Q59GN2 51 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 PRAMEF5Q5TYX0 476 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 TMEM200BQ69YZ2 307 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 C1QL4Q86Z23 238 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 ZFP82Q8N141 532 aa13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 RBMXL1Q96E39 390 aaKnown RBP13.35□□□□□ -0.27
SNRNP35-204ENST00000527158 RAB40CQ96S21 281 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms