RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 SCP2D1Q9UJQ7 156 aa16.51■□□□□ 0.23
CD44-222ENST00000526025 CLPSL1A2RUU4 121 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 NBR2O15453 112 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 CD40LGP29965 261 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 F2RL1P55085 397 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 RND3P61587 244 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 BAK1Q16611 211 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 FAAP20Q6NZ36 180 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 OR2T6Q8NHC8 308 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 CD300LFQ8TDQ1 290 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 TCTEX1D2Q8WW35 142 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 KIAA1456Q9P272 454 aa16.5■□□□□ 0.23
CD44-222ENST00000526025 NCBP2LA6PVI3 153 aaKnown RBP16.49■□□□□ 0.23
CD44-222ENST00000526025 PGLYRP1O75594 196 aaPredicted RBP16.49■□□□□ 0.23
CD44-222ENST00000526025 BLCAPP62952 87 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 SCGB2B2Q4G0G5 96 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 TCTEX1D1Q8N7M0 179 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 OR4S2Q8NH73 311 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 LINC01006Q8NI28 216 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 ZFAND1Q8TCF1 268 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 RITA1Q96K30 269 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 MDFIQ99750 246 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 WDR12Q9GZL7 423 aaKnown RBP16.49■□□□□ 0.23
CD44-222ENST00000526025 HRASLSQ9HDD0 168 aa16.49■□□□□ 0.23
CD44-222ENST00000526025 FAM212BQ9NTI7 297 aaPredicted RBP16.49■□□□□ 0.23
CD44-222ENST00000526025 IL7P13232 177 aa16.48■□□□□ 0.23
CD44-222ENST00000526025 PPP5CP53041 499 aa16.48■□□□□ 0.23
CD44-222ENST00000526025 RPS16P62249 146 aaKnown RBP16.48■□□□□ 0.23
CD44-222ENST00000526025 C5orf64Q2M2E5 130 aa16.48■□□□□ 0.23
CD44-222ENST00000526025 ABCA11PQ4W5N1 156 aa16.48■□□□□ 0.23
CD44-222ENST00000526025 AWAT1Q58HT5 328 aa16.48■□□□□ 0.23
CD44-222ENST00000526025 OR51S1Q8NGJ8 323 aa16.48■□□□□ 0.23
CD44-222ENST00000526025 MRGPRFQ96AM1 343 aa16.48■□□□□ 0.23
CD44-222ENST00000526025 RASL11BQ9BPW5 248 aa16.48■□□□□ 0.23
CD44-222ENST00000526025 NAP1L6A6NFF2 107 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 RRHO14718 337 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 TNFSF12O43508 249 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 FCGR3BO75015 233 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 CRYZL1O95825 349 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 PGAM2P15259 253 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 INPP1P49441 399 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 BRWD1-AS2P59051 145 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 ZNF846Q147U1 533 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 ZNF57Q68EA5 555 aaPredicted RBP16.47■□□□□ 0.23
CD44-222ENST00000526025 IDO2Q6ZQW0 420 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 POC5Q8NA72 575 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 OR13C8Q8NGS7 320 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 SCGB3A2Q96PL1 93 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 C7orf50Q9BRJ6 194 aaKnown RBP16.47■□□□□ 0.23
CD44-222ENST00000526025 SLC2A9Q9NRM0 540 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 MCUBQ9NWR8 336 aa16.47■□□□□ 0.23
CD44-222ENST00000526025 SHOXO15266 292 aa16.46■□□□□ 0.23
CD44-222ENST00000526025 KCNAB3O43448 404 aa16.46■□□□□ 0.23
CD44-222ENST00000526025 IGHG2P01859 326 aa16.46■□□□□ 0.23
CD44-222ENST00000526025 HLA-DRB1P01911 266 aa16.46■□□□□ 0.23
CD44-222ENST00000526025 CTSDP07339 412 aaPredicted RBP16.46■□□□□ 0.23
CD44-222ENST00000526025 MDKP21741 143 aaPredicted RBP16.46■□□□□ 0.23
CD44-222ENST00000526025 CNTFRP26992 372 aa16.46■□□□□ 0.23
CD44-222ENST00000526025 PSG5Q15238 335 aa16.46■□□□□ 0.23
CD44-222ENST00000526025 SPAG16Q8N0X2 631 aa16.46■□□□□ 0.23
CD44-222ENST00000526025 TAF15Q92804 592 aaKnown RBP eCLIP16.46■□□□□ 0.23
CD44-222ENST00000526025 AIFM2Q9BRQ8 373 aa16.46■□□□□ 0.23
CD44-222ENST00000526025 IGLV2-23P01705 113 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 RLN1P04808 185 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 F2RP25116 425 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 PROK1P58294 105 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 PHLDA2Q53GA4 152 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 CCDC71LQ8N9Z2 235 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 OR51H1Q8NH63 302 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 MARCH1Q8TCQ1 289 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 RBMXL1Q96E39 390 aaKnown RBP16.45■□□□□ 0.22
CD44-222ENST00000526025 GPHA2Q96T91 129 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 SERTAD4Q9NUC0 356 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 ZNF580Q9UK33 172 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 RNF114Q9Y508 228 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 STAB1Q9NY15 2570 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 PLXNB1O43157 2135 aa16.45■□□□□ 0.22
CD44-222ENST00000526025 TNCP24821 2201 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 B3GALNT1O75752 331 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 HPRT1P00492 218 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 CRYGBP07316 175 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 VDAC2P45880 294 aaPredicted RBP16.44■□□□□ 0.22
CD44-222ENST00000526025 UBE2KP61086 200 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 VMA21Q3ZAQ7 101 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 OR2B11Q5JQS5 317 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 Q6ZS46 218 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 TEX45Q8NA69 505 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 SLC25A21Q9BQT8 299 aaPredicted RBP16.44■□□□□ 0.22
CD44-222ENST00000526025 PLEKHA2Q9HB19 425 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 COMMD9Q9P000 198 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 GPR132Q9UNW8 380 aa16.44■□□□□ 0.22
CD44-222ENST00000526025 C14orf166Q9Y224 244 aaKnown RBP16.44■□□□□ 0.22
CD44-222ENST00000526025 SRRM4A7MD48 611 aaKnown RBP16.43■□□□□ 0.22
CD44-222ENST00000526025 CENPXA8MT69 81 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 MPPED1O15442 326 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 HRASP01112 189 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 PIGPP57054 158 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 TAS2R31P59538 309 aa16.43■□□□□ 0.22
CD44-222ENST00000526025 POU2AF1Q16633 256 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms