RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 OR5AK3PQ8NH89 298 aa1□□□□□ -2.25
CD44-212ENST00000524922 CDC26Q8NHZ8 85 aa1□□□□□ -2.25
CD44-212ENST00000524922 AGR3Q8TD06 166 aa1□□□□□ -2.25
CD44-212ENST00000524922 RTN4IP1Q8WWV3 396 aaPredicted RBP1□□□□□ -2.25
CD44-212ENST00000524922 PP6455Q8WZ26 134 aa1□□□□□ -2.25
CD44-212ENST00000524922 THRSPQ92748 146 aa1□□□□□ -2.25
CD44-212ENST00000524922 GTF2H4Q92759 462 aa1□□□□□ -2.25
CD44-212ENST00000524922 EMG1Q92979 244 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 VPS33AQ96AX1 596 aa1□□□□□ -2.25
CD44-212ENST00000524922 SLCO4A1Q96BD0 722 aa1□□□□□ -2.25
CD44-212ENST00000524922 SPSB1Q96BD6 273 aa1□□□□□ -2.25
CD44-212ENST00000524922 RCN3Q96D15 328 aa1□□□□□ -2.25
CD44-212ENST00000524922 BPIFA2Q96DR5 249 aa1□□□□□ -2.25
CD44-212ENST00000524922 REEP6Q96HR9 211 aa1□□□□□ -2.25
CD44-212ENST00000524922 KCNA7Q96RP8 456 aa1□□□□□ -2.25
CD44-212ENST00000524922 AMELYQ99218 206 aa1□□□□□ -2.25
CD44-212ENST00000524922 MCHR1Q99705 422 aa1□□□□□ -2.25
CD44-212ENST00000524922 SH3GL1Q99961 368 aa1□□□□□ -2.25
CD44-212ENST00000524922 EBF4Q9BQW3 602 aa1□□□□□ -2.25
CD44-212ENST00000524922 WFDC6Q9BQY6 131 aa1□□□□□ -2.25
CD44-212ENST00000524922 COPS4Q9BT78 406 aa1□□□□□ -2.25
CD44-212ENST00000524922 CENPOQ9BU64 300 aa1□□□□□ -2.25
CD44-212ENST00000524922 TMED9Q9BVK6 235 aa1□□□□□ -2.25
CD44-212ENST00000524922 OSBPL10Q9BXB5 764 aa1□□□□□ -2.25
CD44-212ENST00000524922 TXLNGYQ9BZA5 131 aa1□□□□□ -2.25
CD44-212ENST00000524922 CHST5Q9GZS9 411 aa1□□□□□ -2.25
CD44-212ENST00000524922 PBOV1Q9GZY1 135 aa1□□□□□ -2.25
CD44-212ENST00000524922 SYT4Q9H2B2 425 aa1□□□□□ -2.25
CD44-212ENST00000524922 SPACA1Q9HBV2 294 aa1□□□□□ -2.25
CD44-212ENST00000524922 RPRD1BQ9NQG5 326 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 PTTG3PQ9NZH4 202 aa1□□□□□ -2.25
CD44-212ENST00000524922 MRPL27Q9P0M9 148 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 GHRLQ9UBU3 117 aa1□□□□□ -2.25
CD44-212ENST00000524922 PEF1Q9UBV8 284 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 NUFIP1Q9UHK0 495 aaKnown RBP1□□□□□ -2.25
CD44-212ENST00000524922 EMCNQ9ULC0 261 aa1□□□□□ -2.25
CD44-212ENST00000524922 B9D1Q9UPM9 204 aa1□□□□□ -2.25
CD44-212ENST00000524922 SLC7A11Q9UPY5 501 aa1□□□□□ -2.25
CD44-212ENST00000524922 BAIAP2Q9UQB8 552 aa1□□□□□ -2.25
CD44-212ENST00000524922 POLR1DQ9Y2S0 133 aa1□□□□□ -2.25
CD44-212ENST00000524922 LRRC42Q9Y546 428 aa1□□□□□ -2.25
CD44-212ENST00000524922 TIMM22Q9Y584 194 aa1□□□□□ -2.25
CD44-212ENST00000524922 HILPDAQ9Y5L2 63 aa1□□□□□ -2.25
CD44-212ENST00000524922 TRAV3A0A0B4J244 114 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 C13orf42A0A1B0GVH6 325 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 A0A1W2PPE3 182 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 MFSD2BA6NFX1 497 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 OR2T8A6NH00 312 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 C2orf70A6NJV1 201 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 TRPC5OSA6NMA1 111 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 C11orf98E9PRG8 122 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 F5H5K5 113 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 H3BSH0 61 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 NDUFAB1O14561 156 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 DYNC1I1O14576 645 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZSCAN12O43309 604 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 AKR7A2O43488 359 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SULT1B1O43704 296 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SOX15O60248 233 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SLC16A7O60669 478 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 CCDC22O60826 627 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 PEX11AO75192 247 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 GGCTO75223 188 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 GMNNO75496 209 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 BANF1O75531 89 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ZNF682O95780 498 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 NRASP01111 189 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 IFNA10P01566 189 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 TFF1P04155 84 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 GSTT2P0CG29 244 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 GSTT2BP0CG30 244 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 CLUP10909 449 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 DBTP11182 482 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 HIST1H1BP16401 226 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 TSPOP30536 169 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 IFNGR2P38484 337 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 LGALS7P47929 136 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 CAPZA1P52907 286 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 CRISP1P54107 249 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SLC18A1P54219 525 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 SMIM11AP58511 58 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 ACTBP60709 375 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ACTR3P61158 418 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 B2MP61769 119 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 CTAG1AP78358 180 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 HTD2P86397 168 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 EWSR1Q01844 656 aaKnown RBP eCLIP0.99□□□□□ -2.25
CD44-212ENST00000524922 PRDX4Q13162 271 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 DYNC1I2Q13409 638 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 SCARB2Q14108 478 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 CRMP1Q14194 572 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 EIF2B1Q14232 305 aaKnown RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 HES1Q14469 280 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 MMDQ15546 238 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 GRK1Q15835 563 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 USF2Q15853 346 aaPredicted RBP0.99□□□□□ -2.25
CD44-212ENST00000524922 RPEL1Q2QD12 228 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 KLHL12Q53G59 568 aa0.99□□□□□ -2.25
CD44-212ENST00000524922 ACTBL2Q562R1 376 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms