RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 OR2M7Q8NG81 312 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 CLHC1Q8NHS4 586 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 CDC26Q8NHZ8 85 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 CANT1Q8WVQ1 401 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 RASSF5Q8WWW0 418 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 PYDC1Q8WXC3 89 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 YIPF5Q969M3 257 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 DERL3Q96Q80 235 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 METTL26Q96S19 204 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 UTP23Q9BRU9 249 aaKnown RBP2.09□□□□□ -2.07
SKP1-212ENST00000523966 C9orf16Q9BUW7 83 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 CHID1Q9BWS9 393 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 SLC38A1Q9H2H9 487 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 TRIM45Q9H8W5 580 aaPredicted RBP2.09□□□□□ -2.07
SKP1-212ENST00000523966 CACYBPQ9HB71 228 aaKnown RBP2.09□□□□□ -2.07
SKP1-212ENST00000523966 ABCB9Q9NP78 766 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 OR2S2Q9NQN1 319 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 CALML5Q9NZT1 146 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 ANGPT4Q9Y264 503 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 C15orf41Q9Y2V0 281 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 FAM32AQ9Y421 112 aaKnown RBP2.09□□□□□ -2.07
SKP1-212ENST00000523966 ASB4Q9Y574 426 aa2.09□□□□□ -2.07
SKP1-212ENST00000523966 UNC80Q8N2C7 3258 aa2.09□□□□□ -2.08
SKP1-212ENST00000523966 URB1O60287 2271 aaKnown RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 SZT2Q5T011 3432 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 COL4A2P08572 1712 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 TRIOO75962 3097 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IGKV3D-11A0A0A0MRZ8 115 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IGKV1-6A0A0C4DH72 117 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 GNGT2O14610 69 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 DENRO43583 198 aaKnown RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 E2F6O75461 281 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 NSA2O95478 260 aaKnown RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 GPR75O95800 540 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 CXorf1O96002 111 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IGKV1-39P01597 117 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IGHV1-46P01743 117 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IGKV1D-39P04432 117 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IL3P08700 152 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 CPN2P22792 545 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 PAX6P26367 422 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 PEBP1P30086 187 aaKnown RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 KDELR2P33947 212 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 GPR4P46093 362 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 TGM4P49221 684 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 GZMMP51124 257 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 XKP51811 444 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 OR4D2P58180 307 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 KRTAP10-10P60014 251 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 DSTNP60981 165 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 SELENOWP63302 87 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 PSPHP78330 225 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 HPCAP84074 193 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 CDK6Q00534 326 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IL15RAQ13261 267 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 MED21Q13503 144 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 TOMM34Q15785 309 aaPredicted RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 DEFB133Q30KQ1 61 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 DEFB134Q4QY38 66 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 OGFRL1Q5TC84 451 aaPredicted RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 TBPL2Q6SJ96 375 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 CLEC19AQ6UXS0 136 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IZUMO2Q6UXV1 221 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 VN1R4Q7Z5H5 301 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 CYP4Z1Q86W10 505 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 MSRB3Q8IXL7 192 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 IQCF2Q8IXL9 164 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 CLECL1Q8IZS7 167 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 LRRC25Q8N386 305 aaPredicted RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 SLC25A45Q8N413 288 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 DEFB119Q8N690 84 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 OR4C6Q8NH72 309 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 DOK4Q8TEW6 326 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 PATE1Q8WXA2 126 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 PYURFQ96I23 114 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 TRNT1Q96Q11 434 aaKnown RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 DOHHQ9BU89 302 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 TCEAL2Q9H3H9 227 aaPredicted RBP2.08□□□□□ -2.08
SKP1-212ENST00000523966 LINC00574Q9H8X3 128 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 BCL2L10Q9HD36 194 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 BATF3Q9NR55 127 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 SDHAF3Q9NRP4 125 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 SDHAF2Q9NX18 166 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 C3orf18Q9UK00 162 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 CEP192Q8TEP8 1941 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 BDP1A6H8Y1 2624 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 OTOGLQ3ZCN5 2332 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 BPTFQ12830 3046 aa2.08□□□□□ -2.08
SKP1-212ENST00000523966 TNRC18O15417 2968 aaPredicted RBP2.07□□□□□ -2.08
SKP1-212ENST00000523966 REV3LO60673 3130 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 PCDH15Q96QU1 1955 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 CUL9Q8IWT3 2517 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 ARRDC5A6NEK1 342 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 G3V2T6 193 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 CLDN34H7C241 214 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 M0QX08 132 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 M0R1B8 84 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 TPST1O60507 370 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 UGT2B11O75310 529 aa2.07□□□□□ -2.08
SKP1-212ENST00000523966 OR2B3O76000 313 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms