RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 OR5B3Q8NH48 314 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 RNF183Q96D59 192 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 DNAH2Q9P225 4427 aa8.63□□□□□ -1.03
SDCBP-211ENST00000523441 TMEM213A2RRL7 107 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 HMX3A6NHT5 357 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 IGLL5B9A064 214 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 CD3GP09693 182 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 FCGR1AP12314 374 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 HTR2CP28335 458 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 HLA-DRB3P79483 266 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 C1orf146Q5VVC0 180 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 TMPRSS11AQ6ZMR5 421 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 C11orf45Q8TAV5 145 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 SMIM19Q96E16 107 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 CENPNQ96H22 339 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-211ENST00000523441 Q96MT0 163 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 OR2D2Q9H210 308 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 PLEKHJ1Q9NW61 149 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 RDH8Q9NYR8 311 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 AK3Q9UIJ7 227 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 FBXL7Q9UJT9 491 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 TP53TG1Q9Y2A0 90 aa8.62□□□□□ -1.03
SDCBP-211ENST00000523441 DYNC1H1Q14204 4646 aaKnown RBP8.61□□□□□ -1.03
SDCBP-211ENST00000523441 TRBV5-5A0A0J9YX44 114 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 M0R2N4 97 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 ACTL6BO94805 426 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 ALPLP05186 524 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 GABRB1P18505 474 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 SMN1Q16637 294 aaKnown RBP8.61□□□□□ -1.03
SDCBP-211ENST00000523441 PRSS8Q16651 343 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 MRGPRG-AS1Q2M3A8 158 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 VMA21Q3ZAQ7 101 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 FAM106AQ4KMX7 169 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 CCDC58Q4VC31 144 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 OR2C3Q8N628 320 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 NECAP1Q8NC96 275 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 C2CD4CQ8TF44 421 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 GGHQ92820 318 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 SLC7A6OSQ96CW6 309 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-211ENST00000523441 DCUN1D5Q9BTE7 237 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 CLEC2DQ9UHP7 191 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 RPL36Q9Y3U8 105 aaKnown RBP8.61□□□□□ -1.03
SDCBP-211ENST00000523441 DNAH17Q9UFH2 4485 aa8.61□□□□□ -1.03
SDCBP-211ENST00000523441 DPPA5A6NC42 116 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 PRSS29PA6NIE9 313 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 J3QRK9 145 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 LGALS9O00182 355 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 BET1O15155 118 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 OGG1O15527 345 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 S1PR2O95136 353 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 CRYZL1O95825 349 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 NAPSAO96009 420 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 RPS11P62280 158 aaKnown RBP eCLIP8.6□□□□□ -1.03
SDCBP-211ENST00000523441 MED22Q15528 200 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 RTL8BQ17RB0 113 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 TMEM177Q53S58 311 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 FYTTD1Q96QD9 318 aaKnown RBP8.6□□□□□ -1.03
SDCBP-211ENST00000523441 TMEM59Q9BXS4 323 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 ZNF430Q9H8G1 570 aaPredicted RBP8.6□□□□□ -1.03
SDCBP-211ENST00000523441 SDHAF2Q9NX18 166 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 BABAM2Q9NXR7 383 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 RBM7Q9Y580 266 aaKnown RBP8.6□□□□□ -1.03
SDCBP-211ENST00000523441 DMRT1Q9Y5R6 373 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 PKD1P98161 4303 aa8.6□□□□□ -1.03
SDCBP-211ENST00000523441 TRBV5-7A0A0A0MS05 114 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 TRBV9A0A0B4J1U6 114 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 RAB27BO00194 218 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 UBE2CO00762 179 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 SOCS1O15524 211 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 REG1AP05451 166 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 RPA2P15927 270 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 RPS27AP62979 156 aaKnown RBP8.59□□□□□ -1.03
SDCBP-211ENST00000523441 MED21Q13503 144 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 ZNF124Q15973 351 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 YIF1BQ5BJH7 314 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 OR2B11Q5JQS5 317 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 ZNF880Q6PDB4 577 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 UNQ9165/PRO28630Q6UXU0 137 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 MOB1BQ7L9L4 216 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 CEACAM19Q7Z692 300 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 APRG1Q8IVJ8 170 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 OR6M1Q8NGM8 313 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 RHOXF1Q8NHV9 184 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 PYDC1Q8WXC3 89 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 RARRES2Q99969 163 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
SDCBP-211ENST00000523441 A0A0A6YYD4 124 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 IGKV1-6A0A0C4DH72 117 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 ITGB1BP1O14713 200 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 MYL12AP19105 171 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 LINC00336Q6ZUF6 198 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 GPHB5Q86YW7 130 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 VKORC1L1Q8N0U8 176 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 CBR4Q8N4T8 237 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 APH1BQ8WW43 257 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 C5orf30Q96GV9 206 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 DERL3Q96Q80 235 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms