RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 SFTA3P0C7M3 94 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 SUB1P53999 127 aaKnown RBP eCLIP3.24□□□□□ -1.897e-11■■■■■ 28.3
HDAC2-215ENST00000523334 PRRX1P54821 245 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 HOXA4Q00056 320 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 EIF4E3Q8N5X7 224 aaKnown RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 Q8NA96 180 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 ST6GALNAC3Q8NDV1 305 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 OR8B3Q8NGG8 313 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 RXFP4Q8TDU9 374 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 CORO2AQ92828 525 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 OR4C12Q96R67 309 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 OR8B2Q96RD0 313 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 GINS3Q9BRX5 216 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 FKBP11Q9NYL4 201 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 PRNDQ9UKY0 176 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 LINC00312Q9Y6C7 94 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 DNAH14Q0VDD8 3507 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 SPTBN5Q9NRC6 3674 aaKnown RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 ATXN7O15265 892 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 FGF16O43320 207 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 TSPAN9O75954 239 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 DANCRP0C864 163 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 COX7A1P24310 79 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 PSMB3P49720 205 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 RAB13P51153 203 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 TDGF1P3P51864 188 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 SERF2P84101 59 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 TAGLNQ01995 201 aaKnown RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 LY6DQ14210 128 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 STUMQ69YW2 141 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 FAM122CQ6P4D5 195 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 MOB3BQ86TA1 216 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 RPEQ96AT9 228 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 SLC35E1Q96K37 410 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 HARBI1Q96MB7 349 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 SLC35B3Q9H1N7 401 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 SMCO4Q9NRQ5 59 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 TMEM140Q9NV12 185 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 COA4Q9NYJ1 87 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 HIVEP3Q5T1R4 2406 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 PCSK5Q92824 1860 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 MAP1LC3B2A6NCE7 125 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 RBFOX2O43251 390 aaKnown RBP eCLIP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 ZG16O60844 167 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 RAMP3O60896 148 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 IGKV1-5P01602 117 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 OPN1MWP04001 364 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 OPN1MW2P0DN77 364 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 OPN1MW3P0DN78 364 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 SPP1P10451 314 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 DUTP33316 252 aaKnown RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 RPL30P62888 115 aaKnown RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 ZNF674Q2M3X9 581 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 FFAR4Q5NUL3 377 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 CST9LP1Q5W188 147 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 TMEM88Q6PEY1 159 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 BTNL8Q6UX41 500 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 ZNF788Q6ZQV5 615 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 NANPQ8TBE9 248 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 FAM216AQ8WUB2 273 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 FLYWCH2Q96CP2 140 aaKnown RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 NEIL1Q96FI4 390 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 BSCL2Q96G97 398 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 RSG1Q9BU20 258 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 MAP1LC3BQ9GZQ8 125 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 MS4A7Q9GZW8 240 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-215ENST00000523334 SH3BGRL3Q9H299 93 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 TNCP24821 2201 aa3.24□□□□□ -1.89
HDAC2-215ENST00000523334 NPY1RP25929 384 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 REG1BP48304 166 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 NCMAPQ5T1S8 102 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 DHRS7BQ6IAN0 325 aaPredicted RBP3.23□□□□□ -1.89
HDAC2-215ENST00000523334 UNQ6494/PRO21346Q6UXR6 183 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 CREBBPQ92793 2442 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 SEC11CQ9BY50 192 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 ARV1Q9H2C2 271 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 KIAA1456Q9P272 454 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 ONECUT1Q9UBC0 465 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 RPUSD1Q9UJJ7 312 aaKnown RBP3.23□□□□□ -1.89
HDAC2-215ENST00000523334 TCF19Q9Y242 345 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 SSUH2Q9Y2M2 353 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 COL6A3P12111 3177 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 VPS13AQ96RL7 3174 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 A0A0G2JRQ6 117 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 RBFOX3A6NFN3 312 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 TMEM178BH3BS89 294 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 J3QR06 171 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 CCL3L1P16619 93 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 FHITP49789 147 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 HSPE1P61604 102 aaKnown RBP3.23□□□□□ -1.89
HDAC2-215ENST00000523334 HES1Q14469 280 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 MSMPQ1L6U9 139 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 ZNF585BQ52M93 769 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 AVPI1Q5T686 147 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 OR13D1Q8NGV5 346 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 OR9G1Q8NH87 305 aa3.23□□□□□ -1.89
HDAC2-215ENST00000523334 TAF15Q92804 592 aaKnown RBP eCLIP3.23□□□□□ -1.89
HDAC2-215ENST00000523334 C20orf24Q9BUV8 137 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms