RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 TBPP20226 339 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 VDAC1P21796 283 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 RFX2P48378 723 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 CX3CL1P78423 397 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 TMEM267Q0VDI3 215 aaPredicted RBP12.79□□□□□ -0.36
TNPO1-212ENST00000520850 AKIRIN2Q53H80 203 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 ACTBL2Q562R1 376 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 VAX1Q5SQQ9 334 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 ZNF329Q86UD4 541 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 SNX29P2Q8IUI4 249 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 MINDY2Q8NBR6 621 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 MOB3AQ96BX8 217 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 RBMXL1Q96E39 390 aaKnown RBP12.79□□□□□ -0.36
TNPO1-212ENST00000520850 TMEM68Q96MH6 324 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 RBM38Q9H0Z9 239 aaKnown RBP12.79□□□□□ -0.36
TNPO1-212ENST00000520850 NUBP2Q9Y5Y2 271 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 CMYA5Q8N3K9 4069 aa12.79□□□□□ -0.36
TNPO1-212ENST00000520850 WNK1Q9H4A3 2382 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 VWFP04275 2813 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 SRRM4A7MD48 611 aaKnown RBP12.78□□□□□ -0.36
TNPO1-212ENST00000520850 GABARAPH6UMI1 98 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 FCN1O00602 326 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 SHOXO15266 292 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 RBFOX2O43251 390 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNPO1-212ENST00000520850 UBE2KP61086 200 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 PLGLAQ15195 96 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 C19orf54Q5BKX5 351 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 PYHIN1Q6K0P9 492 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 LPCAT3Q6P1A2 487 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 C10orf99Q6UWK7 81 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 KCTD9Q7L273 389 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 FCAMRQ8WWV6 532 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 HARBI1Q96MB7 349 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 AIFM2Q9BRQ8 373 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 SLC5A7Q9GZV3 580 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 CCL28Q9NRJ3 127 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 RSL24D1Q9UHA3 163 aaKnown RBP12.78□□□□□ -0.36
TNPO1-212ENST00000520850 LINC00527Q9UJ94 153 aa12.78□□□□□ -0.36
TNPO1-212ENST00000520850 MGAM2Q2M2H8 2515 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 J3QRK9 145 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 TSPAN15O95858 294 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 IGLV1-40P01703 118 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 PMP2P02689 132 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 PSMB8P28062 276 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 GNRHRP30968 328 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 HRH1P35367 487 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 CDX1P47902 265 aaPredicted RBP12.77□□□□□ -0.37
TNPO1-212ENST00000520850 UCP3P55916 312 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 HERV-K104P61576 105 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 RPL30P62888 115 aaKnown RBP12.77□□□□□ -0.37
TNPO1-212ENST00000520850 VMA21Q3ZAQ7 101 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 LAX1Q8IWV1 398 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 WFDC9Q8NEX5 89 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 CD300LFQ8TDQ1 290 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 SOSTQ9BQB4 213 aa12.77□□□□□ -0.37
TNPO1-212ENST00000520850 ZNF2Q9BSG1 426 aaPredicted RBP12.77□□□□□ -0.37
TNPO1-212ENST00000520850 TRAV41A0A0B4J266 112 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 ATP6V0E1O15342 81 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 SLC25A17O43808 307 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 BRI3O95415 125 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 CRYZL1O95825 349 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 EGR2P11161 476 aaPredicted RBP12.76□□□□□ -0.37
TNPO1-212ENST00000520850 HLA-DMAP28067 261 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 BRWD1-AS2P59051 145 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 RPL23AP62750 156 aaKnown RBP12.76□□□□□ -0.37
TNPO1-212ENST00000520850 NSUN5P1Q3KNT7 163 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 CXorf66Q5JRM2 361 aaPredicted RBP12.76□□□□□ -0.37
TNPO1-212ENST00000520850 CADM3Q8N126 398 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 OR52I2Q8NH67 350 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 OR4S2Q8NH73 311 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 MYOZ3Q8TDC0 251 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 DIRAS2Q96HU8 199 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 NDUFA13Q9P0J0 144 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 KLK11Q9UBX7 282 aa12.76□□□□□ -0.37
TNPO1-212ENST00000520850 CREBL2O60519 120 aaPredicted RBP12.75□□□□□ -0.37
TNPO1-212ENST00000520850 FCGR3BO75015 233 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 FCER2P06734 321 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 TSPAN5P62079 268 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 CATR1Q13166 79 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 ARRDC1Q8N5I2 433 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 TMEM229BQ8NBD8 167 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 OR5M8Q8NGP6 311 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 MCFD2Q8NI22 146 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 VSTM2AQ8TAG5 236 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 R3HDM4Q96D70 268 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 FAM212BQ9NTI7 297 aaPredicted RBP12.75□□□□□ -0.37
TNPO1-212ENST00000520850 TAS2R8Q9NYW2 309 aa12.75□□□□□ -0.37
TNPO1-212ENST00000520850 CA2P00918 260 aa12.74□□□□□ -0.37
TNPO1-212ENST00000520850 HRASP01112 189 aa12.74□□□□□ -0.37
TNPO1-212ENST00000520850 CD74P04233 296 aa12.74□□□□□ -0.37
TNPO1-212ENST00000520850 FGF2P09038 288 aa12.74□□□□□ -0.37
TNPO1-212ENST00000520850 TNFSF8P32971 234 aa12.74□□□□□ -0.37
TNPO1-212ENST00000520850 FXYD4P59646 89 aa12.74□□□□□ -0.37
TNPO1-212ENST00000520850 NDPQ00604 133 aa12.74□□□□□ -0.37
TNPO1-212ENST00000520850 FXYD3Q14802 87 aa12.74□□□□□ -0.37
TNPO1-212ENST00000520850 MRGPRG-AS1Q2M3A8 158 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms