RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 A0A0B4J293 547 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 FAM181BA6NEQ2 426 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 FAM90A9PA6NNJ1 464 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 RAMP3O60896 148 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 H2AFB2P0C5Z0 115 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 AKR1C4P17516 323 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 F2RP25116 425 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 RAB25P57735 213 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 PPP1R1AQ13522 171 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 KRTAP24-1Q3LI83 254 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 ADTRPQ96IZ2 230 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 MARVELD1Q9BSK0 173 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 BEX1Q9HBH7 125 aa12.26□□□□□ -0.45
LSM1-203ENST00000520755 TET2Q6N021 2002 aaPredicted RBP12.26□□□□□ -0.45
LSM1-203ENST00000520755 A6NDX4 124 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 H0Y980 276 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 PEX14O75381 377 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 SNRNP70P08621 437 aaKnown RBP12.25□□□□□ -0.45
LSM1-203ENST00000520755 OR5AC1P0C628 307 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 TAS2R31P59538 309 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 CATR1Q13166 79 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 HES1Q14469 280 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 ZNF585BQ52M93 769 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 PLET1Q6UQ28 207 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
LSM1-203ENST00000520755 CHPT1Q8WUD6 406 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 SLC35D1Q9NTN3 355 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 LIN7CQ9NUP9 197 aaKnown RBP12.25□□□□□ -0.45
LSM1-203ENST00000520755 PRR13Q9NZ81 148 aa12.25□□□□□ -0.45
LSM1-203ENST00000520755 C3orf85A0A1B0GTC6 90 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 CHST1O43916 411 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 FCGR3BO75015 233 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 IGKV1D-33P01593 117 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 IGKV1-33P01594 117 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 APOA2P02652 100 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 CRYBA1P05813 215 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 OR4E1P0C645 316 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 FAM106CPP0CH98 169 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 CD1BP29016 333 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 UBE2MP61081 183 aaKnown RBP12.24□□□□□ -0.45
LSM1-203ENST00000520755 HNF4GQ14541 408 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 SP6Q3SY56 376 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 TMEM128Q5BJH2 165 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 DHRS7BQ6IAN0 325 aaPredicted RBP12.24□□□□□ -0.45
LSM1-203ENST00000520755 PDPNQ86YL7 162 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 SPAG16Q8N0X2 631 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 Q8N6K4 173 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 OR52B4Q8NGK2 314 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 LHFPL5Q8TAF8 219 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 TAF15Q92804 592 aaKnown RBP eCLIP12.24□□□□□ -0.45
LSM1-203ENST00000520755 GALNT14Q96FL9 552 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 RITA1Q96K30 269 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 SEC22CQ9BRL7 303 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 WASHC3Q9Y3C0 194 aa12.24□□□□□ -0.45
LSM1-203ENST00000520755 TEX13DA0A0J9YY54 714 aaPredicted RBP12.23□□□□□ -0.45
LSM1-203ENST00000520755 RNF212BA8MTL3 300 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 INMT-MINDY4F8WBC2 141 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 RBFOX2O43251 390 aaKnown RBP eCLIP12.23□□□□□ -0.45
LSM1-203ENST00000520755 S1PR2O95136 353 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 CRYZL1O95825 349 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 IGKV1-39P01597 117 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 IGKV1D-39P04432 117 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 TMEM11P17152 192 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 UCP1P25874 307 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 S100GP29377 79 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 DHRS2Q13268 280 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 EBI3Q14213 229 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 TMEM187Q14656 261 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 LIAT1Q6ZQX7 453 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 GLYATL2Q8WU03 294 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 TMEM158Q8WZ71 300 aa12.23□□□□□ -0.45
LSM1-203ENST00000520755 ALX4Q9H161 411 aaPredicted RBP12.23□□□□□ -0.45
LSM1-203ENST00000520755 C9orf170A2RU37 121 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 H7C2Y5 167 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 SFT2D2O95562 160 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 HLA-AP01891 365 aaKnown RBP12.22□□□□□ -0.45
LSM1-203ENST00000520755 VAMP1P23763 118 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 CNTFRP26992 372 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 KIR2DS2P43631 304 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 RAG2P55895 527 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 RTL8BQ17RB0 113 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 TRIM16LQ309B1 348 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 ANKRD55Q3KP44 614 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 TMEM177Q53S58 311 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 LYG2Q86SG7 212 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 THNSL2Q86YJ6 484 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 SGPP2Q8IWX5 399 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 OR4S2Q8NH73 311 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 EAF1Q96JC9 268 aaPredicted RBP12.22□□□□□ -0.45
LSM1-203ENST00000520755 SLC25A33Q9BSK2 321 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 C19orf24Q9BVV8 132 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 TMEM222Q9H0R3 208 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 RAB18Q9NP72 206 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 FAM212BQ9NTI7 297 aaPredicted RBP12.22□□□□□ -0.45
LSM1-203ENST00000520755 PRELID3BQ9Y3B1 194 aa12.22□□□□□ -0.45
LSM1-203ENST00000520755 PLXNB1O43157 2135 aa12.21□□□□□ -0.45
LSM1-203ENST00000520755 IGLV2-23P01705 113 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms