RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MIPP30301 263 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 CD200P41217 278 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 CDKN2BP42772 138 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 PPICP45877 212 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 MARCKSL1P49006 195 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 GZMMP51124 257 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 UBE2E1P51965 193 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 CRISP3P54108 245 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 EMP1P54849 157 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 H2BFSP57053 126 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 LCN6P62502 163 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 SELENOWP63302 87 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 RELAQ04206 551 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 LAMTOR4Q0VGL1 99 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 KIAA0087Q14695 138 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF726P1Q15940 193 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 IAH1Q2TAA2 248 aaPredicted RBP2.27□□□□□ -2.05
VPS13B-207ENST00000518569 SCGB2B2Q4G0G5 96 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 TMEM69Q5SWH9 247 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 C1orf194Q5T5A4 169 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF684Q5T5D7 378 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 HENMT1Q5T8I9 393 aaKnown RBP2.27□□□□□ -2.05
VPS13B-207ENST00000518569 IGFL3Q6UXB1 125 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 CROCCP2Q86T23 111 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 CBLN2Q8IUK8 224 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 PIANPQ8IYJ0 282 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 SAXO1Q8IYX7 474 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF567Q8N184 647 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 OR5AR1Q8NGP9 310 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 OR9I1Q8NGQ6 314 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 OR1N2Q8NGR9 330 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 TERB2Q8NHR7 220 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 SDR42E1Q8WUS8 393 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 ROPN1LQ96C74 230 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 NARS2Q96I59 477 aaKnown RBP2.27□□□□□ -2.05
VPS13B-207ENST00000518569 UBE2E2Q96LR5 201 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 RDH12Q96NR8 316 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 BIRC8Q96P09 236 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 OR7D2Q96RA2 312 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 DOHHQ9BU89 302 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 TBL1XR1Q9BZK7 514 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 HES4Q9HCC6 221 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 SLCO1B3Q9NPD5 702 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 PRTFDC1Q9NRG1 225 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 UBQLN4Q9NRR5 601 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 ZNF226Q9NYT6 803 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 TAS2R5Q9NYW4 299 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 OR12D3Q9UGF7 316 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 LAMTOR3Q9UHA4 124 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 TRMT112Q9UI30 125 aaKnown RBP2.27□□□□□ -2.05
VPS13B-207ENST00000518569 HSPB8Q9UJY1 196 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 LAMB4A4D0S4 1761 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 COL18A1P39060 1754 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 TOGARAM1Q9Y4F4 1720 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 CEP290O15078 2479 aa2.27□□□□□ -2.05
VPS13B-207ENST00000518569 NRXN1Q9ULB1 1477 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 DAPK1P53355 1430 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 MYOM3Q5VTT5 1437 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 GTF3C1Q12789 2109 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 PTPRJQ12913 1337 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 IGSF9BQ9UPX0 1349 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 A0A096LPI6 279 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 TRAV39A0A0B4J263 110 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 A0A1B0GX51 115 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 A0A1W2PRE2 83 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 GMNCA6NCL1 334 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 OR5H14A6NHG9 310 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 OR5H1A6NKK0 313 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 EEF1E1-BLOC1S5C9J1V9 151 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 TMX2-CTNND1H3BSU7 103 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 K7EMT4 169 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 PEX7O00628 323 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 TP53I11O14683 189 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 GYG2O15488 501 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 EEF1E1O43324 174 aaKnown RBP2.26□□□□□ -2.05
VPS13B-207ENST00000518569 MFSD11O43934 449 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 GCM2O75603 506 aaPredicted RBP2.26□□□□□ -2.05
VPS13B-207ENST00000518569 ARL6IP5O75915 188 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 IFNA17P01571 189 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 PGA4P0DJD7 388 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 PGA3P0DJD8 388 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 PGA5P0DJD9 388 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 MPC1LP0DKB6 136 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 GABRG2P18507 467 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 GZMHP20718 246 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 CDK2P24941 298 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 CMPK1P30085 196 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 TSPOP30536 169 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 GGT2P36268 569 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 NMUP48645 174 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 INPP1P49441 399 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 EIF2B2P49770 351 aaKnown RBP2.26□□□□□ -2.05
VPS13B-207ENST00000518569 SLC18A1P54219 525 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 DAD1P61803 113 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 RRAS2P62070 204 aaPredicted RBP2.26□□□□□ -2.05
VPS13B-207ENST00000518569 RPS28P62857 69 aaKnown RBP2.26□□□□□ -2.05
VPS13B-207ENST00000518569 PPP3R1P63098 170 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 HPCAP84074 193 aa2.26□□□□□ -2.05
VPS13B-207ENST00000518569 PRDX1Q06830 199 aaKnown RBP2.26□□□□□ -2.05
VPS13B-207ENST00000518569 TMEM267Q0VDI3 215 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms