RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TP53RKQ96S44 253 aa7.87□□□□□ -1.15
CLN8-202ENST00000517514 SLC25A21Q9BQT8 299 aaPredicted RBP7.87□□□□□ -1.15
CLN8-202ENST00000517514 TNCP24821 2201 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 CRYM-AS1A6NIL9 109 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 SH2D7A6NKC9 451 aaPredicted RBP7.86□□□□□ -1.15
CLN8-202ENST00000517514 TCF21O43680 179 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 OR2F2O95006 317 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 NDUFA3O95167 84 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 CRYZL1O95825 349 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 TCRBP04435 133 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 FAM106CPP0CH98 169 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 TMEM11P17152 192 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 ECI1P42126 302 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 RBMS2Q15434 407 aaKnown RBP7.86□□□□□ -1.15
CLN8-202ENST00000517514 SP6Q3SY56 376 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 RBMS3Q6XE24 437 aaKnown RBP7.86□□□□□ -1.15
CLN8-202ENST00000517514 NRARPQ7Z6K4 114 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 SLC25A42Q86VD7 318 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 SPAG16Q8N0X2 631 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 FAM71E2Q8N5Q1 922 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 C5orf56Q8N8D9 126 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 DUSP18Q8NEJ0 188 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 NPBQ8NG41 125 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 LHFPL5Q8TAF8 219 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 SLC25A33Q9BSK2 321 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 TPSG1Q9NRR2 321 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 TENM1Q9UKZ4 2725 aa7.86□□□□□ -1.15
CLN8-202ENST00000517514 FAM181BA6NEQ2 426 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 CENPXA8MT69 81 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 H7C2Y5 167 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 FCN1O00602 326 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 ARPC1BO15143 372 aaKnown RBP7.85□□□□□ -1.15
CLN8-202ENST00000517514 RBFOX2O43251 390 aaKnown RBP eCLIP7.85□□□□□ -1.15
CLN8-202ENST00000517514 PEX14O75381 377 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 S1PR2O95136 353 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 APOA2P02652 100 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 IL6RP08887 468 aaPredicted RBP7.85□□□□□ -1.15
CLN8-202ENST00000517514 ANXA7P20073 488 aaKnown RBP7.85□□□□□ -1.15
CLN8-202ENST00000517514 UCP1P25874 307 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 ARHGDIBP52566 201 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 BLCAPP62952 87 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 SSBP2P81877 361 aaPredicted RBP7.85□□□□□ -1.15
CLN8-202ENST00000517514 TAGLNQ01995 201 aaKnown RBP7.85□□□□□ -1.15
CLN8-202ENST00000517514 HES1Q14469 280 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 PSG5Q15238 335 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 C16orf87Q6PH81 154 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 C11orf88Q6PI97 169 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 CMTM1Q8IZ96 169 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 VKORC1L1Q8N0U8 176 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 POC5Q8NA72 575 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 GLYATL2Q8WU03 294 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 C20orf85Q9H1P6 137 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 NAA60Q9H7X0 242 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 FAM212BQ9NTI7 297 aaPredicted RBP7.85□□□□□ -1.15
CLN8-202ENST00000517514 PRR13Q9NZ81 148 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 C1RLQ9NZP8 487 aa7.85□□□□□ -1.15
CLN8-202ENST00000517514 C14orf166Q9Y224 244 aaKnown RBP7.85□□□□□ -1.15
CLN8-202ENST00000517514 C3orf85A0A1B0GTC6 90 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 FAM240BA0A1B0GVZ2 78 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 LINC01548A6NM66 108 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 H0Y980 276 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 OR5AC1P0C628 307 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 P0C879 139 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 RRASP10301 218 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 AKR1C4P17516 323 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 KIR2DS2P43631 304 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 LPAR6P43657 344 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 MECP2P51608 486 aaKnown RBP7.84□□□□□ -1.15
CLN8-202ENST00000517514 RPS16P62249 146 aaKnown RBP7.84□□□□□ -1.15
CLN8-202ENST00000517514 CATR1Q13166 79 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 PPP1R1AQ13522 171 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 TMEM187Q14656 261 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 POU2AF1Q16633 256 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 RTL8BQ17RB0 113 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 ABCA11PQ4W5N1 156 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 DHRS7BQ6IAN0 325 aaPredicted RBP7.84□□□□□ -1.15
CLN8-202ENST00000517514 TMED4Q7Z7H5 227 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 PUSL1Q8N0Z8 303 aaKnown RBP7.84□□□□□ -1.15
CLN8-202ENST00000517514 CCDC71LQ8N9Z2 235 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 OR4C13Q8NGP0 309 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 OR4S2Q8NH73 311 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 OSR1Q8TAX0 266 aaPredicted RBP7.84□□□□□ -1.15
CLN8-202ENST00000517514 FLYWCH2Q96CP2 140 aaKnown RBP7.84□□□□□ -1.15
CLN8-202ENST00000517514 GALNT14Q96FL9 552 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 HARBI1Q96MB7 349 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 SCGB3A2Q96PL1 93 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 RNF5Q99942 180 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 FBXL15Q9H469 300 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 ZNF702PQ9H963 129 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 PALMDQ9NP74 551 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 COPZ2Q9P299 210 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 MOB4Q9Y3A3 225 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 PRELID3BQ9Y3B1 194 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 ATRQ13535 2644 aa7.84□□□□□ -1.15
CLN8-202ENST00000517514 TRAV6A0A075B6T7 132 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 TRAV3A0A0B4J244 114 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 A0A0G2JRQ6 117 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 TEX13DA0A0J9YY54 714 aaPredicted RBP7.83□□□□□ -1.16
CLN8-202ENST00000517514 RNF212BA8MTL3 300 aa7.83□□□□□ -1.16
CLN8-202ENST00000517514 RRHO14718 337 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms