RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LHFPL1Q86WI0 220 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 SMIM19Q96E16 107 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 LLPHQ9BRT6 129 aaKnown RBP1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 DENND4BO75064 1496 aaPredicted RBP1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 PTPRSQ13332 1948 aa1.66□□□□□ -2.14
HMGCS1-207ENST00000514610 REREQ9P2R6 1566 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 A0A087WUU8 490 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 TMSB15BA0A087X1C1 80 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 OR6C6A6NF89 314 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 RFPL4AA6NLU0 287 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 RFPL4AL1F8VTS6 287 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 ITGB1BP1O14713 200 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 CETN3O15182 167 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 BPGMP07738 259 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 RAP1GDS1P52306 607 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 BTN3A2P78410 334 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 MGAT3Q09327 533 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 EBPQ15125 230 aaKnown RBP1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 UAP1Q16222 522 aaPredicted RBP1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 ZNF791Q3KP31 576 aaPredicted RBP1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 KRTAP21-3Q3LHN1 58 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 NMNAT3Q96T66 252 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 TTTY13Q9BZ97 58 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 PLEKHJ1Q9NW61 149 aa1.65□□□□□ -2.15
HMGCS1-207ENST00000514610 KIAA2026Q5HYC2 2103 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 TRAV41A0A0B4J266 112 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 ZNF705FA8MVS1 300 aaPredicted RBP1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 GOLGA8KD6RF30 607 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 GOLGA8MH3BSY2 632 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 BHLHE40O14503 412 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 GABRA2P47869 451 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 CTBP2P56545 445 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 CXCR4P61073 352 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 HSP90B2PQ58FF3 399 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 PABPC1L2AQ5JQF8 200 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 GPHB5Q86YW7 130 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 FAM9CQ8IZT9 166 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 TMEM251Q8N6I4 163 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 OR5J2Q8NH18 312 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 EEF1AKMT1Q8WVE0 214 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 DHRS9Q9BPW9 319 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 HHLA3Q9XRX5 114 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 PRRC2BQ5JSZ5 2229 aaKnown RBP1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 KDM5BQ9UGL1 1544 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 CR1P17927 2039 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 GREB1Q4ZG55 1949 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 ZNF532Q9HCE3 1301 aa1.64□□□□□ -2.15
HMGCS1-207ENST00000514610 FN1P02751 2386 aaKnown RBP1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 HEATR5AQ86XA9 2040 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 C5orf49A4QMS7 147 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 NPYP01303 97 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 HLA-DQB2P05538 268 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 TPM3P06753 285 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 RPL27AP46776 148 aaKnown RBP1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 TPM4P67936 248 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 ERHP84090 104 aaKnown RBP1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 GNA12Q03113 381 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 SLC35E3Q7Z769 313 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 NAA40Q86UY6 237 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 KCTD7Q96MP8 289 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 DRC3Q9H069 523 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 HDHD2Q9H0R4 259 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 SPANXB1Q9NS25 103 aaPredicted RBP1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
HMGCS1-207ENST00000514610 ABCC12Q96J65 1359 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 MYH11P35749 1972 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 SIGLEC16A6NMB1 481 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 C9JCJ5 164 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 HLA-DRAP01903 254 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 COX5BP10606 129 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 CCR2P41597 374 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 TBPL1P62380 186 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 HOXC5Q00444 222 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 LRRC28Q86X40 367 aaPredicted RBP1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 OR51T1Q8NGJ9 327 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 LHFPL5Q8TAF8 219 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 TMEM222Q9H0R3 208 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 HES4Q9HCC6 221 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 TAAR3PQ9P1P4 343 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 ATP6V1DQ9Y5K8 247 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 CPAMD8Q8IZJ3 1885 aa1.62□□□□□ -2.15
HMGCS1-207ENST00000514610 COL4A1P02462 1669 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 MALRD1Q5VYJ5 2156 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 A8MUN3 132 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 TXNDC9O14530 226 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 GPX1P07203 203 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 UCHL1P09936 223 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 IDH3GP51553 393 aaPredicted RBP1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 BLVRAP53004 296 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 PPP1R1AQ13522 171 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 N4BP2L1Q5TBK1 243 aaPredicted RBP1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 OR13C8Q8NGS7 320 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 ZNF563Q8TA94 476 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 ZNF675Q8TD23 568 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 RAB2BQ8WUD1 216 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 C12orf43Q96C57 262 aaKnown RBP1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 ANKRD36BP1Q96IX9 119 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 BABAM2Q9NXR7 383 aa1.61□□□□□ -2.15
HMGCS1-207ENST00000514610 C15orf41Q9Y2V0 281 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms