RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 POC5Q8NA72 575 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 BVESQ8NE79 360 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 LGALS14Q8TCE9 139 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 ADTRPQ96IZ2 230 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 RHOVQ96L33 236 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 MS4A10Q96PG2 267 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 OR51E2Q9H255 320 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 DCSTAMPQ9H295 470 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 DAPK2Q9UIK4 370 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 SSR3Q9UNL2 185 aa8.07□□□□□ -1.12
HMGXB3-205ENST00000514469 TMEM235A6NFC5 223 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 SRRM4A7MD48 611 aaKnown RBP8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 SHOXO15266 292 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 SAP30O75446 220 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 BRI3O95415 125 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 IGHV3-11P01762 117 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 TRGV3P03979 118 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 HSPB1P04792 205 aaKnown RBP8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 CD40LGP29965 261 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 SDC2P34741 201 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 SCAND1P57086 179 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 ACSM6Q6P461 480 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 ZNF645Q8N7E2 425 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 NUDCD2Q8WVJ2 157 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 SLC25A38Q96DW6 304 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 RHBDL2Q9NX52 303 aa8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 RRP15Q9Y3B9 282 aaKnown RBP8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 RBM7Q9Y580 266 aaKnown RBP8.06□□□□□ -1.12
HMGXB3-205ENST00000514469 TENM3Q9P273 2699 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 SSX5O60225 188 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 CNIH1O95406 144 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 HLA-DQB1P01920 261 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 CTXN2P0C2S0 81 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 CLEC2LP0C7M8 214 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 GNG2P59768 71 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 UBE2KP61086 200 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 PITPNAQ00169 270 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 VMA21Q3ZAQ7 101 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 KCTD21Q4G0X4 260 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 CNIH2Q6PI25 160 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 OVCH2Q7RTZ1 564 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 TEX45Q8NA69 505 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 OSR1Q8TAX0 266 aaPredicted RBP8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 TMEM68Q96MH6 324 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 ST6GALNAC5Q9BVH7 336 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 RNF167Q9H6Y7 350 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 OR2W1Q9Y3N9 320 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 ETV7Q9Y603 341 aa8.05□□□□□ -1.12
HMGXB3-205ENST00000514469 IGKV1D-13A0A0B4J2D9 117 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 SLC22A5O76082 557 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 CRYZL1O95825 349 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 IGLV2-14P01704 120 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 NHLRC4P0CG21 123 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 IGKV1-13P0DP09 117 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 NFYAP23511 347 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 MXD1Q05195 221 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 PRSS8Q16651 343 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 OR5T1Q8NG75 326 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 OR5H6Q8NGV6 325 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 TINAGL1Q9GZM7 467 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 ANXA10Q9UJ72 324 aa8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 RBMX2Q9Y388 322 aaKnown RBP8.04□□□□□ -1.12
HMGXB3-205ENST00000514469 DNAH7Q8WXX0 4024 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 A0A0A6YYH2 397 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 A0A0G2JLM5 398 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 LOC100506127A0A0U1RQW1 187 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 C13orf42A0A1B0GVH6 325 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 A6NJ64 397 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 TUSC2O75896 110 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 LY86O95711 162 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 SAA1P0DJI8 122 aaPredicted RBP8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 CD36P16671 472 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 AADACP22760 399 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 EIF4EBP1Q13541 118 aaPredicted RBP8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 CDK10Q15131 360 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 NEDD8Q15843 81 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 TNXAQ16473 311 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 IDO2Q6ZQW0 420 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 KCTD9Q7L273 389 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 OR6Q1Q8NGQ2 317 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 SRSF12Q8WXF0 261 aaKnown RBP8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 WWC2-AS2Q96NR7 200 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 RANGRFQ9HD47 186 aaPredicted RBP8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 ZNF355PQ9NSJ1 428 aa8.03□□□□□ -1.12
HMGXB3-205ENST00000514469 HUWE1Q7Z6Z7 4374 aaKnown RBP8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 J3QRK9 145 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 CREBL2O60519 120 aaPredicted RBP8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 FCGR3BO75015 233 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 TMEM127O75204 238 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 GP9P14770 177 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 SPNP16150 400 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 ZP3P21754 424 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 RPL30P62888 115 aaKnown RBP8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 DEFA5Q01523 94 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 DYRK1AQ13627 763 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 IDNKQ5T6J7 187 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 ADAD2Q8NCV1 583 aaKnown RBP8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 BEST4Q8NFU0 473 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 PHB2Q99623 299 aa8.02□□□□□ -1.13
HMGXB3-205ENST00000514469 ZNF430Q9H8G1 570 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms