RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 UBE2KP61086 200 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 RPS16P62249 146 aaKnown RBP7.56□□□□□ -1.2
RNF4-221ENST00000513643 PJVKQ0ZLH3 352 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 FHL3Q13643 280 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 OXLD1Q5BKU9 147 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 TMEM69Q5SWH9 247 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 LCNL1Q6ZST4 164 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 PPP1R27Q86WC6 154 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 TCTEX1D1Q8N7M0 179 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 ZNF491Q8N8L2 437 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 TEX45Q8NA69 505 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 ZBTB34Q8NCN2 500 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 OSR1Q8TAX0 266 aaPredicted RBP7.56□□□□□ -1.2
RNF4-221ENST00000513643 RAX2Q96IS3 184 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 UBE2E2Q96LR5 201 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 BCL7BQ9BQE9 202 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 COMMD3Q9UBI1 195 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 ADAM30Q9UKF2 790 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 WSB1Q9Y6I7 421 aa7.56□□□□□ -1.2
RNF4-221ENST00000513643 SULT1C2O00338 296 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 SLC25A17O43808 307 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 CA2P00918 260 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 IL6RP08887 468 aaPredicted RBP7.55□□□□□ -1.2
RNF4-221ENST00000513643 PRSS3P35030 304 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 RPL5P46777 297 aaKnown RBP7.55□□□□□ -1.2
RNF4-221ENST00000513643 RAB9AP51151 201 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 TMBIM6P55061 237 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 DYRK1AQ13627 763 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 SPCS2Q15005 226 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 CDK10Q15131 360 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 PDLIM3Q53GG5 364 aaPredicted RBP7.55□□□□□ -1.2
RNF4-221ENST00000513643 CXorf66Q5JRM2 361 aaPredicted RBP7.55□□□□□ -1.2
RNF4-221ENST00000513643 ASPHD1Q5U4P2 390 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 ZNF66Q6ZN08 573 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 C8orf86Q6ZUL3 223 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 GPR141Q7Z602 305 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 MFSD4AQ8N468 514 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 C4orf3Q8WVX3 66 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 HSD17B10Q99714 261 aaKnown RBP7.55□□□□□ -1.2
RNF4-221ENST00000513643 SCPEP1Q9HB40 452 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 PARP11Q9NR21 331 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 NECAP2Q9NVZ3 263 aa7.55□□□□□ -1.2
RNF4-221ENST00000513643 CCL24O00175 119 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 RBFOX2O43251 390 aaKnown RBP eCLIP7.54□□□□□ -1.2
RNF4-221ENST00000513643 HPGDSO60760 199 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 PF4V1P10720 104 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 IGLL1P15814 213 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 GNRHRP30968 328 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 RFX2P48378 723 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 ARPC4P59998 168 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 EGFEM1PQ0D2K5 195 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 TMEM267Q0VDI3 215 aaPredicted RBP7.54□□□□□ -1.2
RNF4-221ENST00000513643 FXYD3Q14802 87 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 PRSS8Q16651 343 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 RTL8BQ17RB0 113 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 PUSL1Q8N0Z8 303 aaKnown RBP7.54□□□□□ -1.2
RNF4-221ENST00000513643 KLHL30-AS1Q8NEE0 82 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 OR5M8Q8NGP6 311 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 DYNC2LI1Q8TCX1 351 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 RAB2BQ8WUD1 216 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 AP3S1Q92572 193 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 ARPC1AQ92747 370 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 RCC1LQ96I51 464 aaKnown RBP7.54□□□□□ -1.2
RNF4-221ENST00000513643 HARBI1Q96MB7 349 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 TMEM68Q96MH6 324 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 MIXL1Q9H2W2 232 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 CCL28Q9NRJ3 127 aa7.54□□□□□ -1.2
RNF4-221ENST00000513643 FOXA2Q9Y261 457 aaPredicted RBP7.54□□□□□ -1.2
RNF4-221ENST00000513643 RBM7Q9Y580 266 aaKnown RBP7.54□□□□□ -1.2
RNF4-221ENST00000513643 MEIS3P1A6NDR6 274 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 J3QRK9 145 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 SHOXO15266 292 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 DUS4LO95620 317 aaKnown RBP7.53□□□□□ -1.2
RNF4-221ENST00000513643 CRYZL1O95825 349 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 KLK9Q2XQG4 91 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 PYHIN1Q6K0P9 492 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 MZT2AQ6P582 158 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 CADM3Q8N126 398 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 LFNGQ8NES3 379 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 MOB3AQ96BX8 217 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 RHOVQ96L33 236 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 CLCC1Q96S66 551 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 ABHD1Q96SE0 405 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 FAM103A1Q9BTL3 118 aaKnown RBP7.53□□□□□ -1.2
RNF4-221ENST00000513643 GNB4Q9HAV0 340 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 VSIG4Q9Y279 399 aa7.53□□□□□ -1.2
RNF4-221ENST00000513643 SMIM31A0A1B0GVY4 71 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 A0A1W2PN81 502 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 H3BUA1 57 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 CTDSP2O14595 271 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 FCGR3BO75015 233 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 PF4P02776 101 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 FCER2P06734 321 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 FGF2P09038 288 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 SAA1P0DJI8 122 aaPredicted RBP7.52□□□□□ -1.21
RNF4-221ENST00000513643 CD33P20138 364 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 CHRNA7P36544 502 aa7.52□□□□□ -1.21
RNF4-221ENST00000513643 TAS2R46P59540 309 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms