RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ZNF833PQ6ZTB9 187 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 COMMD7Q86VX2 200 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 ZNF295-AS1Q8N0V1 137 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 OR52E5Q8NH55 327 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 OR4S2Q8NH73 311 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 RAB1CQ92928 201 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 TNFRSF14Q92956 283 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 R3HDM4Q96D70 268 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 S1PR3Q99500 378 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 REG4Q9BYZ8 158 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 WFDC1Q9HC57 220 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 MIOXQ9UGB7 285 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 PFDN2Q9UHV9 154 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 ABCA4P78363 2273 aa6.87□□□□□ -1.31
RNF4-220ENST00000513578 MFSD2BA6NFX1 497 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 A6NNC1 897 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 MARCH11A6NNE9 402 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 MMP23AO75900 390 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 DFFBO76075 338 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 KRASP01116 189 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 IL6RP08887 468 aaPredicted RBP6.86□□□□□ -1.31
RNF4-220ENST00000513578 FGF2P09038 288 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 SPP1P10451 314 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 NQO2P16083 231 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 EPHA1P21709 976 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 NFYBP25208 207 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 G6PCP35575 357 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 SULT1A1P50225 295 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 SULT1A2P50226 295 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 RAB5CP51148 216 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 RIPPLY3P57055 190 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 UBE2KP61086 200 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 NHLH2Q02577 135 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 TNFRSF9Q07011 255 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 ZNF816Q0VGE8 651 aaPredicted RBP6.86□□□□□ -1.31
RNF4-220ENST00000513578 AANATQ16613 207 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 RPL39P5Q59GN2 51 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 PRAMEF5Q5TYX0 476 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 C1orf229Q6ZS94 237 aaPredicted RBP6.86□□□□□ -1.31
RNF4-220ENST00000513578 H2BFWTQ7Z2G1 175 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 C11orf42Q8N5U0 333 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 LY6G5BQ8NDX9 201 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 TMEM186Q96B77 213 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 NEIL1Q96FI4 390 aaPredicted RBP6.86□□□□□ -1.31
RNF4-220ENST00000513578 TIMD4Q96H15 378 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 CIB3Q96Q77 187 aaPredicted RBP6.86□□□□□ -1.31
RNF4-220ENST00000513578 AIFM2Q9BRQ8 373 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 PARD6GQ9BYG4 376 aaPredicted RBP6.86□□□□□ -1.31
RNF4-220ENST00000513578 MAGT1Q9H0U3 335 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 CHODLQ9H9P2 273 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 TET2Q6N021 2002 aaPredicted RBP6.86□□□□□ -1.31
RNF4-220ENST00000513578 NBASA2RRP1 2371 aa6.86□□□□□ -1.31
RNF4-220ENST00000513578 MEX3AA1L020 520 aaKnown RBP6.85□□□□□ -1.31
RNF4-220ENST00000513578 RAB19A4D1S5 217 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 J3QR06 171 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 FCGR3BO75015 233 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 HRASP01112 189 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 SOD3P08294 240 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 OR8U8P0C7N1 319 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 IGHV1-8P0DP01 117 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 CCL3L1P16619 93 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 CAV2P51636 162 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 BLOC1S1P78537 153 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 IZUMO4Q1ZYL8 232 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 UTF1Q5T230 341 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 TMEM14EPQ6UXP3 125 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 ZNF429Q86V71 674 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 STX12Q86Y82 276 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 PUSL1Q8N0Z8 303 aaKnown RBP6.85□□□□□ -1.31
RNF4-220ENST00000513578 LYG1Q8N1E2 194 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 ZNF383Q8NA42 475 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 OR8B3Q8NGG8 313 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 OR1S2Q8NGQ3 325 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 OR9G1Q8NH87 305 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 TMED6Q8WW62 240 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 H1FXQ92522 213 aaKnown RBP6.85□□□□□ -1.31
RNF4-220ENST00000513578 ST6GALNAC6Q969X2 333 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 BSCL2Q96G97 398 aaPredicted RBP6.85□□□□□ -1.31
RNF4-220ENST00000513578 CXorf58Q96LI9 332 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 OR8B2Q96RD0 313 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 TSNAXQ99598 290 aaKnown RBP6.85□□□□□ -1.31
RNF4-220ENST00000513578 PCGF1Q9BSM1 259 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 PATZ1Q9HBE1 687 aaKnown RBP6.85□□□□□ -1.31
RNF4-220ENST00000513578 PSENENQ9NZ42 101 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 SESN1Q9Y6P5 492 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 COL12A1Q99715 3063 aa6.85□□□□□ -1.31
RNF4-220ENST00000513578 SPTBN1Q01082 2364 aaKnown RBP6.84□□□□□ -1.31
RNF4-220ENST00000513578 RELNP78509 3460 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 A0A1W2PPR1 153 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 A8MXK9 166 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 B8ZZF3 427 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 C19orf84I3L1E1 186 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.31
RNF4-220ENST00000513578 CT45A6P0DMU7 189 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 CT45A5P0DMU8 189 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 CT45A7P0DMV0 189 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 DYNLT3P51808 116 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 SPCS3P61009 180 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 ERVK-16P61578 105 aa6.84□□□□□ -1.31
RNF4-220ENST00000513578 ATP6V1FQ16864 119 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms