RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 K7N7A8 449 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 SULT1B1O43704 296 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 CLPXO76031 633 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 NDUFA7O95182 113 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 OR2H2O95918 312 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 IGLV3-1P01715 115 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ALDOBP05062 364 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ISG15P05161 165 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 FCER2P06734 321 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 OR9G9P0C7N8 305 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 GP9P14770 177 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 NFYBP25208 207 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 PAX6P26367 422 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 DCKP27707 260 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 HTR1DP28221 377 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 BRS3P32247 399 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 CEACAM3P40198 252 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ID1P41134 155 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 PTGFRP43088 359 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 GLP1RP43220 463 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 NPBWR2P48146 333 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 TAS2R43P59537 309 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 MEF2CQ06413 473 aaPredicted RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 AESQ08117 197 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 IL18R1Q13478 541 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 HES1Q14469 280 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 SSX2Q16385 188 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 TAF9Q16594 264 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ANKRD55Q3KP44 614 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 PAN3Q58A45 887 aaKnown RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 SPIN3Q5JUX0 258 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ATAD3CQ5T2N8 411 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 DDI2Q5TDH0 399 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 PRAMEF5Q5TYX0 476 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ZNF691Q5VV52 312 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 TMEM42Q69YG0 159 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 METAP1DQ6UB28 335 aaPredicted RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 UTS2BQ765I0 119 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 C8orf59Q8N0T1 100 aaPredicted RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 SYS1Q8N2H4 156 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 OR51A4Q8NGJ6 313 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 OR52I1Q8NGK6 324 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 OR10K1Q8NGX5 313 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 OR10AC1Q8NH08 325 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 RHOXF1Q8NHV9 184 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 CNIH3Q8TBE1 160 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ZNF596Q8TC21 504 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 PELI1Q96FA3 418 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 TMEM80Q96HE8 168 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 AKR1E2Q96JD6 320 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 RDH12Q96NR8 316 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 OR5M11Q96RB7 305 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 MBOAT4Q96T53 435 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 SLC29A1Q99808 456 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 PDCD1LG2Q9BQ51 273 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 METTL9Q9H1A3 318 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ISG20L2Q9H9L3 353 aaKnown RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 HMG20AQ9NP66 347 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 C8orf4Q9NR00 106 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 RBFOX1Q9NWB1 397 aaKnown RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 PAK1IP1Q9NWT1 392 aaPredicted RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 TAS2R4Q9NYW5 299 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 MTCH1Q9NZJ7 389 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 ZNF222Q9UK12 451 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 DIMT1Q9UNQ2 313 aaKnown RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 EXOSC1Q9Y3B2 195 aaKnown RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 TBL2Q9Y4P3 447 aaKnown RBP2.75□□□□□ -1.97
NUP54-212ENST00000513248 HILPDAQ9Y5L2 63 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 LINC00312Q9Y6C7 94 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 RYR3Q15413 4870 aa2.75□□□□□ -1.97
NUP54-212ENST00000513248 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.74□□□□□ -1.97
NUP54-212ENST00000513248 IGKV1-27A0A075B6S5 117 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 A0A0A6YYD4 124 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 IGHV2-26A0A0B4J1V2 119 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 IGKV1-9A0A0C4DH69 117 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 EFCAB10A6NFE3 127 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 OR4C45A6NMZ5 311 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 LEUTXA8MZ59 168 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ANKRD65E5RJM6 399 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 FCN3O75636 299 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 CDRT1O95170 752 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 CLIC3O95833 236 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 RBP4P02753 201 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 MAS1P04201 325 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 IGHV1-8P0DP01 117 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 SERPINA2P20848 420 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 CDK2P24941 298 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ZNF93P35789 620 aaPredicted RBP2.74□□□□□ -1.97
NUP54-212ENST00000513248 VDAC2P45880 294 aaPredicted RBP2.74□□□□□ -1.97
NUP54-212ENST00000513248 OR3A4PP47883 348 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 GNG10P50151 68 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ETV1P50549 477 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 RAB13P51153 203 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 GTF2A1P52655 376 aaPredicted RBP2.74□□□□□ -1.97
NUP54-212ENST00000513248 RIPK1Q13546 671 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 GPR176Q14439 515 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ATXN7L3Q14CW9 347 aaPredicted RBP2.74□□□□□ -1.97
NUP54-212ENST00000513248 HERPUD1Q15011 391 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms