RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZNF645Q8N7E2 425 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 SAMD12Q8N8I0 201 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 OR13F1Q8NGS4 319 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 ARPC1AQ92747 370 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 GPHA2Q96T91 129 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 DIABLOQ9NR28 239 aa12.82□□□□□ -0.36
DDX41-213ENST00000512027 FOXA2Q9Y261 457 aaPredicted RBP12.82□□□□□ -0.36
DDX41-213ENST00000512027 I3L521 148 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 TUSC2O75896 110 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 CTXN2P0C2S0 81 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 ARPC4P59998 168 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 FXYD3Q14802 87 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 RTL8BQ17RB0 113 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 MRGPRG-AS1Q2M3A8 158 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 UBE2NLQ5JXB2 153 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 ASPHD1Q5U4P2 390 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 ZNF562Q6V9R5 426 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 IDO2Q6ZQW0 420 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 HOGA1Q86XE5 327 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 OR11H1Q8NG94 326 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 SNAPC3Q92966 411 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 MS4A10Q96PG2 267 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 VSIG4Q9Y279 399 aa12.81□□□□□ -0.36
DDX41-213ENST00000512027 RBMX2Q9Y388 322 aaKnown RBP12.81□□□□□ -0.36
DDX41-213ENST00000512027 A0A0A6YYH2 397 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 A6NJ64 397 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 DUS4LO95620 317 aaKnown RBP12.8□□□□□ -0.36
DDX41-213ENST00000512027 APELAP0DMC3 54 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 AADACP22760 399 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 CBX3Q13185 183 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 ACTBL2Q562R1 376 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 KCTD9Q7L273 389 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 CROCCP3Q8IVE0 287 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 SLC25A46Q96AG3 418 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 UBE2E2Q96LR5 201 aa12.8□□□□□ -0.36
DDX41-213ENST00000512027 WI2-2373I1.2A0A1W2PRP0 233 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 K7EIL1 84 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 XRCC3O43542 346 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 FCGR3BO75015 233 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 CNIH1O95406 144 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 IGHV3-11P01762 117 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 EIF4EP06730 217 aaKnown RBP12.79□□□□□ -0.36
DDX41-213ENST00000512027 FCGR2CP31995 323 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 LGALS7P47929 136 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 TAS2R20P59543 309 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 DEFA5Q01523 94 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 TAGLNQ01995 201 aaKnown RBP12.79□□□□□ -0.36
DDX41-213ENST00000512027 FHL3Q13643 280 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 REC114Q7Z4M0 266 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 SECTM1Q8WVN6 248 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 S100A16Q96FQ6 103 aaKnown RBP12.79□□□□□ -0.36
DDX41-213ENST00000512027 ADTRPQ96IZ2 230 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 COMMD3Q9UBI1 195 aa12.79□□□□□ -0.36
DDX41-213ENST00000512027 TNCP24821 2201 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 TNFSF12O43508 249 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 RRASP10301 218 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 EGFEM1PQ0D2K5 195 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 TMEM267Q0VDI3 215 aaPredicted RBP12.78□□□□□ -0.36
DDX41-213ENST00000512027 EIF4EBP1Q13541 118 aaPredicted RBP12.78□□□□□ -0.36
DDX41-213ENST00000512027 AKIRIN2Q53H80 203 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 TMEM69Q5SWH9 247 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 TCTEX1D1Q8N7M0 179 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 OR5M8Q8NGP6 311 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 OR1N2Q8NGR9 330 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 TCTEX1D2Q8WW35 142 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 CCL28Q9NRJ3 127 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 TAS2R8Q9NYW2 309 aa12.78□□□□□ -0.36
DDX41-213ENST00000512027 TMEM127O75204 238 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 SAA1P0DJI8 122 aaPredicted RBP12.77□□□□□ -0.37
DDX41-213ENST00000512027 BRWD1-AS2P59051 145 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 TPPP2P59282 170 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 FXYD4P59646 89 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 TNXAQ16473 311 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 VMA21Q3ZAQ7 101 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 VKORC1L1Q8N0U8 176 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 DCUN1D5Q9BTE7 237 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 MCRIP2Q9BUT9 160 aaKnown RBP12.77□□□□□ -0.37
DDX41-213ENST00000512027 IFT46Q9NQC8 304 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 ZNF355PQ9NSJ1 428 aa12.77□□□□□ -0.37
DDX41-213ENST00000512027 IGHV4OR15-8A0A075B7B6 117 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 A0A087WW49 117 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 PPYP01298 95 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 TRGV3P03979 118 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 SLURP1P55000 103 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 UBE2KP61086 200 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 RUNX1Q01196 453 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 ZNF616Q08AN1 781 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 C10orf55Q5SWW7 151 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 OVCH2Q7RTZ1 564 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 TMEM17Q86X19 198 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 OR5AP2Q8NGF4 316 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 OSR1Q8TAX0 266 aaPredicted RBP12.76□□□□□ -0.37
DDX41-213ENST00000512027 ACOT12Q8WYK0 555 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 DPF1Q92782 380 aa12.76□□□□□ -0.37
DDX41-213ENST00000512027 COL7A1Q02388 2944 aa12.75□□□□□ -0.37
DDX41-213ENST00000512027 SEC14L6B5MCN3 397 aa12.75□□□□□ -0.37
DDX41-213ENST00000512027 HPGDSO60760 199 aa12.75□□□□□ -0.37
DDX41-213ENST00000512027 SLC22A5O76082 557 aa12.75□□□□□ -0.37
DDX41-213ENST00000512027 GABARAPO95166 117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms