RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 KCTD9Q7L273 389 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 TBC1D26Q86UD7 250 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 LINC00311Q8N616 119 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 ZNF645Q8N7E2 425 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.32□□□□□ -1.72
PROM1-211ENST00000511153 GDPD1Q8N9F7 314 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 S100ZQ8WXG8 99 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 CFHR4Q92496 578 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 MOB3AQ96BX8 217 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 MALSU1Q96EH3 234 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 S1PR3Q99500 378 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 AGMATQ9BSE5 352 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 SLC35D1Q9NTN3 355 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 TMEM160Q9NX00 188 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 TBC1D24Q9ULP9 559 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 VSIG4Q9Y279 399 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 RBMX2Q9Y388 322 aaKnown RBP4.32□□□□□ -1.72
PROM1-211ENST00000511153 MINOS1-NBL1R4GNA1 71 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 NF1P21359 2839 aa4.32□□□□□ -1.72
PROM1-211ENST00000511153 A6NDX4 124 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 BTBD17A6NE02 478 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 LINC01548A6NM66 108 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 H0YJW9 148 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 ARPC1BO15143 372 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 TCF21O43680 179 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 PGLYRP1O75594 196 aaPredicted RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 NXPH3O95157 252 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 CD74P04233 296 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 ANXA7P20073 488 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 MECP2P51608 486 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 PIGPP57054 158 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 UBE2MP61081 183 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 RPS16P62249 146 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 GNB1P62873 340 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 BLCAPP62952 87 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 UBA52P62987 128 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 MMDQ15546 238 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 SRSF7Q16629 238 aaKnown RBP eCLIP4.31□□□□□ -1.72
PROM1-211ENST00000511153 KRTAP21-3Q3LHN1 58 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 ABCA11PQ4W5N1 156 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 ACTBL2Q562R1 376 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 VAX1Q5SQQ9 334 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 LIN54Q6MZP7 749 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 C16orf87Q6PH81 154 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 DHRS11Q6UWP2 260 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 ZNF554Q86TJ5 538 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 FAM219AQ8IW50 185 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 C11orf44Q8N8P7 122 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 POC5Q8NA72 575 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 ZBTB34Q8NCN2 500 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 CASTOR1Q8WTX7 329 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 C15orf40Q8WUR7 153 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 GIMAP1Q8WWP7 306 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 SLC25A33Q9BSK2 321 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 WDR12Q9GZL7 423 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 FBXL15Q9H469 300 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 PIPOXQ9P0Z9 390 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 TCF19Q9Y242 345 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 TEX13DA0A0J9YY54 714 aaPredicted RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 SRRM4A7MD48 611 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 VGLL3A8MV65 326 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 GPR31O00270 319 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 FCN1O00602 326 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 LYRM1O43325 122 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 SLC25A17O43808 307 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 UPK1BO75841 260 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 S1PR2O95136 353 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 MOSP00540 346 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 APOA2P02652 100 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 PTBP1P26599 531 aaKnown RBP eCLIP4.31□□□□□ -1.72
PROM1-211ENST00000511153 BRS3P32247 399 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 DUTP33316 252 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 BTCP35070 178 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 FAUP35544 74 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 G6PCP35575 357 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 LPAR6P43657 344 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 BRWD1-AS2P59051 145 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 AP3S2P59780 193 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 HILS1P60008 231 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 SRSF4Q08170 494 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 PJVKQ0ZLH3 352 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 MEF2DQ14814 521 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 PLGLAQ15195 96 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 KRTAP24-1Q3LI83 254 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 TMEM30BQ3MIR4 351 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 TMEM177Q53S58 311 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 SPINK9Q5DT21 86 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 DHRS7BQ6IAN0 325 aaPredicted RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 CCDC144NLQ6NUI1 221 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 CFAP161Q6P656 301 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 C9orf139Q6ZV77 190 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 LHFPL1Q86WI0 220 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 SPAG16Q8N0X2 631 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 OR8H3Q8N146 312 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 UXS1Q8NBZ7 420 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 OR52B4Q8NGK2 314 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 TERB2Q8NHR7 220 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 ABHD5Q8WTS1 349 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 SSMEM1Q8WWF3 244 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 HARBI1Q96MB7 349 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms