RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 SFTPBP07988 381 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 GATA1P15976 413 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 M6PRP20645 277 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 KITLGP21583 273 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 S100GP29377 79 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 HAAOP46952 286 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 CCL11P51671 97 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 PAX5Q02548 391 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 MSMO1Q15800 293 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 FAM106AQ4KMX7 169 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 SPIN3Q5JUX0 258 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 THOC7Q6I9Y2 204 aaKnown RBP5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 C17orf107Q6ZR85 190 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 Q6ZS92 163 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 MDP1Q86V88 176 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 CALHM1Q8IU99 346 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 PDZD9Q8IXQ8 264 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 LGI3Q8N145 548 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR4A4PQ8NGN8 299 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 CASTOR1Q8WTX7 329 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 LURAP1Q96LR2 239 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 SPIN2AQ99865 258 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 SPIN2BQ9BPZ2 258 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 FAAP24Q9BTP7 215 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR51I2Q9H344 312 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 ZNF442Q9H7R0 627 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 NAA60Q9H7X0 242 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 RASL12Q9NYN1 266 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 NUP50Q9UKX7 468 aa5.48□□□□□ -1.53
TRAPPC11-206ENST00000509857 WDR87Q6ZQQ6 2873 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 TRDCB7Z8K6 153 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 SMPD2O60906 423 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 NXPH4O95158 308 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 CDS2O95674 445 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 CFDP00746 253 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 IGHV3-9P01782 118 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 GAPDHP04406 335 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 NMBP08949 121 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 SLC25A6P12236 298 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 TPT1P13693 172 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 IGHV1-2P23083 117 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 GLRA1P23415 457 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 IL32P24001 234 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 GPM6AP51674 278 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 PPP1CBP62140 327 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 SMCO1Q147U7 214 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 ZNF146Q15072 292 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 ANKRD55Q3KP44 614 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 PIGYQ3MUY2 71 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 ACSF3Q4G176 576 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 ABCA11PQ4W5N1 156 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 PAN3Q58A45 887 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 GPR157Q5UAW9 335 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 UQCC3Q6UW78 93 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 FAM58AQ8N1B3 248 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 Q8N377 158 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 STPG2Q8N412 459 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 FAM71E2Q8N5Q1 922 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 OR10G7Q8NGN6 311 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 RTN4IP1Q8WWV3 396 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 TLNRD1Q9H1K6 362 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 METTL8Q9H825 291 aaKnown RBP5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 FAM212BQ9NTI7 297 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 MBD2Q9UBB5 411 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 GLS2Q9UI32 602 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 GTF3C1Q12789 2109 aa5.47□□□□□ -1.53
TRAPPC11-206ENST00000509857 A0A0C4DFX4 3053 aa5.46□□□□□ -1.53
TRAPPC11-206ENST00000509857 INTS1Q8N201 2190 aaKnown RBP5.46□□□□□ -1.53
TRAPPC11-206ENST00000509857 IGKV1D-8A0A087WSZ0 117 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 RAB19A4D1S5 217 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 A8MXK9 166 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 PRSS46E5RG02 174 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 E5RGE8 158 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 GPR31O00270 319 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 SDCBPO00560 298 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 PPYP01298 95 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 PGA5P0DJD9 388 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 BCL3P20749 454 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 CCNOP22674 350 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 FCGR2CP31995 323 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 CFHR2P36980 270 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 CD200P41217 278 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 NOVA1P51513 510 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 UCP2P55851 309 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 PIGPP57054 158 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 HIKESHIQ53FT3 197 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 VASH2Q86V25 355 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 COMMD7Q86VX2 200 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 BAP18Q8IXM2 172 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 CMTM1Q8IZ96 169 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 TCTEX1D1Q8N7M0 179 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 OR8G5Q8NG78 346 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 RBPMSQ93062 196 aaKnown RBP5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 AKR1E2Q96JD6 320 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 TMEM56Q96MV1 263 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 NRIP2Q9BQI9 281 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 RNF126Q9BV68 326 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 TOLLIPQ9H0E2 274 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 SLC2A9Q9NRM0 540 aa5.46□□□□□ -1.54
TRAPPC11-206ENST00000509857 MTCH1Q9NZJ7 389 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms