RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 OR5H6Q8NGV6 325 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 SLC25A38Q96DW6 304 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 YIPF6Q96EC8 236 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 HSPB9Q9BQS6 159 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 AGMATQ9BSE5 352 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 FUNDC2Q9BWH2 189 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 GPR61Q9BZJ8 451 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 DCSTAMPQ9H295 470 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 IFT46Q9NQC8 304 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 PARP11Q9NR21 331 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 ELF5Q9UKW6 265 aaPredicted RBP3.8□□□□□ -1.8
HTT-206ENST00000509618 SPATA2Q9UM82 520 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 WASHC3Q9Y3C0 194 aa3.8□□□□□ -1.8
HTT-206ENST00000509618 SORL1Q92673 2214 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 TRBV6-7A0A0A0MS04 114 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 TMEM238LA0A1B0GVL6 79 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 A0A1B0GVY2 172 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 SMIM31A0A1B0GVY4 71 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 LINC01548A6NM66 108 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 CCL24O00175 119 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 RRHO14718 337 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 ATP6V0E1O15342 81 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 HLA-DRB1P01911 266 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 FCER2P06734 321 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 SPNP16150 400 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 NFYAP23511 347 aaPredicted RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 CNTFRP26992 372 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 RPS19P39019 145 aaKnown RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 MYCNOSP40205 109 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 VBP1P61758 197 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 NCS1P62166 190 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 EWSR1Q01844 656 aaKnown RBP eCLIP3.79□□□□□ -1.8
HTT-206ENST00000509618 SRSF7Q16629 238 aaKnown RBP eCLIP3.79□□□□□ -1.8
HTT-206ENST00000509618 ECSCRQ19T08 205 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 C5orf64Q2M2E5 130 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 ZNF260Q3ZCT1 412 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 TMEM69Q5SWH9 247 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 CNIH2Q6PI25 160 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 TMEM65Q6PI78 240 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 Q6ZS49 121 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 GPR141Q7Z602 305 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 PDPNQ86YL7 162 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 H1FOOQ8IZA3 346 aaPredicted RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 ZNF383Q8NA42 475 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 BEST4Q8NFU0 473 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 NPBQ8NG41 125 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 OR5AN1Q8NGI8 311 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 OR13F1Q8NGS4 319 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 SLC25A46Q96AG3 418 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 FLYWCH2Q96CP2 140 aaKnown RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 S100A16Q96FQ6 103 aaKnown RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 RITA1Q96K30 269 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 CLCC1Q96S66 551 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 TSNAXQ99598 290 aaKnown RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 MCRIP2Q9BUT9 160 aaKnown RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 MRPS26Q9BYN8 205 aaKnown RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 OR51J1Q9H342 316 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 FBXL15Q9H469 300 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 PLSCR3Q9NRY6 295 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 SLC35D1Q9NTN3 355 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 SDHAF2Q9NX18 166 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 COMMD3Q9UBI1 195 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 METTL1Q9UBP6 276 aaKnown RBP3.79□□□□□ -1.8
HTT-206ENST00000509618 ANXA10Q9UJ72 324 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 WSB1Q9Y6I7 421 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 A3GALT2U3KPV4 340 aa3.79□□□□□ -1.8
HTT-206ENST00000509618 DNAH17Q9UFH2 4485 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 IGKV1D-8A0A087WSZ0 117 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 IGHV7-81A0A0B4J1V7 117 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 TRAV41A0A0B4J266 112 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 MEIS3P1A6NDR6 274 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 FAM25AB3EWG3 89 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 FAM25CB3EWG5 89 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 FAM25GB3EWG6 89 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 SHOXO15266 292 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 XRCC3O43542 346 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 SLC25A17O43808 307 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 SSX5O60225 188 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 NOL3O60936 208 aaKnown RBP3.78□□□□□ -1.8
HTT-206ENST00000509618 TUSC2O75896 110 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 SLC22A5O76082 557 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 NDUFA3O95167 84 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 SPDEFO95238 335 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 CNIH1O95406 144 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 IGKV1-16P04430 117 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 IGF1P05019 195 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 ELANEP08246 267 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 SMIM18P0DKX4 95 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 IGHV4-30-4P0DP06 118 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 RRASP10301 218 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 CD40LGP29965 261 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 CBX5P45973 191 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 RORCP51449 518 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 LINC00205P59089 165 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 GNB1P62873 340 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 CX3CL1P78423 397 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 TMEM267Q0VDI3 215 aaPredicted RBP3.78□□□□□ -1.8
HTT-206ENST00000509618 FOXE3Q13461 319 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 PSG5Q15238 335 aa3.78□□□□□ -1.8
HTT-206ENST00000509618 VMA21Q3ZAQ7 101 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms