RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FAM96BQ9Y3D0 163 aa4.43□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGKV1-6A0A0C4DH72 117 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 MEIOCA2RUB1 952 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF736B4DX44 427 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 INAFM1C9JVW0 142 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 LY6LH3BQJ8 138 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 BUB1B-PAK6H3BSN5 160 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 BET1O15155 118 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 LANCL1O43813 399 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 MMP23AO75900 390 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 CD74P04233 296 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 GAPDHP04406 335 aaKnown RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 IFNA6P05013 189 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR5H8P0DN80 308 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGHV4-38-2P0DP08 117 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 COX7A1P24310 79 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 CD40LGP29965 261 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 BRS3P32247 399 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 FAUP35544 74 aaKnown RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 LUMP51884 338 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 RPP30P78346 268 aaKnown RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF816Q0VGE8 651 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 HERPUD1Q15011 391 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF79Q15937 498 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 LTC4SQ16873 150 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 PYDC2Q56P42 97 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGSF11Q5DX21 431 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 RNASE10Q5GAN6 216 aaKnown RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 CT45A1Q5HYN5 189 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 VAX1Q5SQQ9 334 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 RBMS3Q6XE24 437 aaKnown RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 H1FOOQ8IZA3 346 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 GVQW1Q8N7I0 195 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF439Q8NDP4 499 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR4P4Q8NGL7 312 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR10X1Q8NGY0 326 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR6F1Q8NGZ6 308 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR52I2Q8NH67 350 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR5R1Q8NH85 324 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 CT45A3Q8NHU0 189 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF418Q8TF45 676 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 SNAPC3Q92966 411 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 RPEQ96AT9 228 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 AKR1E2Q96JD6 320 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 S1PR3Q99500 378 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 CCDC32Q9BV29 185 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 SRRQ9GZT4 340 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 DPAGT1Q9H3H5 408 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 RDH8Q9NYR8 311 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 KLK11Q9UBX7 282 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF221Q9UK13 617 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR2W1Q9Y3N9 320 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 POMT1Q9Y6A1 747 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 V9GYH0 126 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 C2CD3Q4AC94 2353 aa4.42□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGKV1D-8A0A087WSZ0 117 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGHV3-43A0A0B4J1X8 118 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ANKRD20A5PA0PJZ0 165 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 MEX3AA1L020 520 aaKnown RBP4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 BTBD17A6NE02 478 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 NAP1L6A6NFF2 107 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 CENPXA8MT69 81 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 DISC1C4P0D8 188 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 CLDN34H7C241 214 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 FCER2P06734 321 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 AKAIN1P0CW23 69 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 IGHV3-43DP0DP04 118 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 PTHLHP12272 177 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 S100GP29377 79 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 FCGR2CP31995 323 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 MC5RP33032 325 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 HRH1P35367 487 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 SAA4P35542 130 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 PPP1CCP36873 323 aaKnown RBP4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 INPP1P49441 399 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 GNG10P50151 68 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 PPP5CP53041 499 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 HERV-K104P61576 105 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 TSPAN5P62079 268 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 SSBP2P81877 361 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 KLRD1Q13241 179 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF846Q147U1 533 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 SURF2Q15527 256 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 TPTE2P1Q5T6R2 138 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF660Q6AZW8 331 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 STEAP1BQ6NZ63 245 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 BRD3OSQ6XYD6 125 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 C16orf82Q7Z2V1 217 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 TOMM5Q8N4H5 51 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF645Q8N7E2 425 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 OR10V1Q8NGI7 309 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 SSMEM1Q8WWF3 244 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 MAFIPQ8WZ33 124 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 TOMM40LQ969M1 308 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ST6GALNAC6Q969X2 333 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNF486Q96H40 463 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ADTRPQ96IZ2 230 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 SCGB3A2Q96PL1 93 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 PRRT1Q99946 306 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 C7orf50Q9BRJ6 194 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms