RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 WASHC3Q9Y3C0 194 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 PLXNB1O43157 2135 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 SRRM4A7MD48 611 aaKnown RBP13.98□□□□□ -0.17
TRIM60-203ENST00000508504 OR4E1P0C645 316 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 VAMP1P23763 118 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 DYNLT3P51808 116 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 DHODHQ02127 395 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 CATR1Q13166 79 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 SLC9A3R2Q15599 337 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 VKORC1L1Q8N0U8 176 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 GLYATL2Q8WU03 294 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 EAF1Q96JC9 268 aaPredicted RBP13.98□□□□□ -0.17
TRIM60-203ENST00000508504 PRELID3BQ9Y3B1 194 aa13.98□□□□□ -0.17
TRIM60-203ENST00000508504 A0A0B4J293 547 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 S1PR2O95136 353 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 IGKV1-39P01597 117 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 APOA2P02652 100 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 IGKV1D-39P04432 117 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 FAM157CP0CG43 387 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 S100GP29377 79 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 BRS3P32247 399 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 F2RL1P55085 397 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 DHRS2Q13268 280 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 SGPP2Q8IWX5 399 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 LHFPL5Q8TAF8 219 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 SEC22CQ9BRL7 303 aa13.97□□□□□ -0.17
TRIM60-203ENST00000508504 LIN7CQ9NUP9 197 aaKnown RBP13.97□□□□□ -0.17
TRIM60-203ENST00000508504 TNCP24821 2201 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 INMT-MINDY4F8WBC2 141 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 H0Y980 276 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 RPA2P15927 270 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 MC5RP33032 325 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 MECP2P51608 486 aaKnown RBP13.96□□□□□ -0.17
TRIM60-203ENST00000508504 ARHGDIBP52566 201 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 EBI3Q14213 229 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 C4orf46Q504U0 113 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 PDPNQ86YL7 162 aa13.96□□□□□ -0.17
TRIM60-203ENST00000508504 C9orf170A2RU37 121 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 RNF212BA8MTL3 300 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 MOSP00540 346 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 HLA-AP01891 365 aaKnown RBP13.95□□□□□ -0.18
TRIM60-203ENST00000508504 FAM106CPP0CH98 169 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 LPAR6P43657 344 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 UBE2MP61081 183 aaKnown RBP13.95□□□□□ -0.18
TRIM60-203ENST00000508504 TMEM187Q14656 261 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 AANATQ16613 207 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 RTL8BQ17RB0 113 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 ANKRD55Q3KP44 614 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 Q8N6K4 173 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 CASTOR1Q8WTX7 329 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 CHPT1Q8WUD6 406 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 FLYWCH2Q96CP2 140 aaKnown RBP13.95□□□□□ -0.18
TRIM60-203ENST00000508504 GALNT14Q96FL9 552 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 TMEM222Q9H0R3 208 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 CHST1O43916 411 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 UCP1P25874 307 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 TAS2R31P59538 309 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 SRSF2Q01130 221 aaKnown RBP13.95□□□□□ -0.18
TRIM60-203ENST00000508504 TRIM16LQ309B1 348 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 OR4C13Q8NGP0 309 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 OR2T10Q8NGZ9 312 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 OR4S2Q8NH73 311 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 SSMEM1Q8WWF3 244 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 CHIAQ9BZP6 476 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 ALX4Q9H161 411 aaPredicted RBP13.95□□□□□ -0.18
TRIM60-203ENST00000508504 PLSCR3Q9NRY6 295 aa13.95□□□□□ -0.18
TRIM60-203ENST00000508504 A6NDX4 124 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 DNAJC9-AS1A6NH13 148 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 RBFOX2O43251 390 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRIM60-203ENST00000508504 SFT2D2O95562 160 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 IFNA2P01563 188 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 IGLV2-23P01705 113 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 TMEM11P17152 192 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 RPS16P62249 146 aaKnown RBP13.94□□□□□ -0.18
TRIM60-203ENST00000508504 TMEM177Q53S58 311 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 LIN54Q6MZP7 749 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 SSX9Q7RTT3 188 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 THNSL2Q86YJ6 484 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 HARBI1Q96MB7 349 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 TPSG1Q9NRR2 321 aa13.94□□□□□ -0.18
TRIM60-203ENST00000508504 SHOXO15266 292 aa13.93□□□□□ -0.18
TRIM60-203ENST00000508504 SERPINE2P07093 398 aa13.93□□□□□ -0.18
TRIM60-203ENST00000508504 TAGLNQ01995 201 aaKnown RBP13.93□□□□□ -0.18
TRIM60-203ENST00000508504 RBMS3Q6XE24 437 aaKnown RBP13.93□□□□□ -0.18
TRIM60-203ENST00000508504 LYG2Q86SG7 212 aa13.93□□□□□ -0.18
TRIM60-203ENST00000508504 TAF15Q92804 592 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRIM60-203ENST00000508504 KCNIP3Q9Y2W7 256 aa13.93□□□□□ -0.18
TRIM60-203ENST00000508504 CDS2O95674 445 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 KRASP01116 189 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 RRASP10301 218 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 G6PCP35575 357 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 KIR2DS2P43631 304 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 MMDQ15546 238 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 IZUMO4Q1ZYL8 232 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 CD300LFQ8TDQ1 290 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 PLEKHA2Q9HB19 425 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 VPREB3Q9UKI3 123 aa13.92□□□□□ -0.18
TRIM60-203ENST00000508504 SH2D7A6NKC9 451 aaPredicted RBP13.91□□□□□ -0.18
TRIM60-203ENST00000508504 SLC25A17O43808 307 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms