RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MCTS1Q9ULC4 181 aaKnown RBP0.9□□□□□ -2.27
SMN2-208ENST00000508258 ANAPC10Q9UM13 185 aa0.9□□□□□ -2.27
SMN2-208ENST00000508258 SNX12Q9UMY4 172 aa0.9□□□□□ -2.27
SMN2-208ENST00000508258 COQ4Q9Y3A0 265 aa0.9□□□□□ -2.27
SMN2-208ENST00000508258 ZNF337Q9Y3M9 751 aa0.9□□□□□ -2.27
SMN2-208ENST00000508258 HSPE1-MOB4S4R3N1 261 aa0.9□□□□□ -2.27
SMN2-208ENST00000508258 DHX57Q6P158 1386 aaKnown RBP0.9□□□□□ -2.27
SMN2-208ENST00000508258 ABCC12Q96J65 1359 aa0.9□□□□□ -2.27
SMN2-208ENST00000508258 OTOFQ9HC10 1997 aa0.9□□□□□ -2.27
SMN2-208ENST00000508258 ZFYVE9O95405 1425 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 DCCP43146 1447 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 CHD5Q8TDI0 1954 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 CACNA1SQ13698 1873 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 GRIN2BQ13224 1484 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 A0A087WUU8 490 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 TGIF2-C20orf24A0A0A6YYL0 155 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 IGHV3-15A0A0B4J1V0 119 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 IGHV3-73A0A0B4J1V6 119 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 IGHV1-69-2A0A0G2JMI3 117 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 GRIFINA4D1Z8 144 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 TMEM210A6NLX4 147 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 OR5K4A6NMS3 321 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 OR4C45A6NMZ5 311 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 ODF3BA8MYP8 253 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 OR11H12B2RN74 326 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 TMEM114B3SHH9 223 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 C9JCJ5 164 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 INMT-MINDY4F8WBC2 141 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 G3V3Q6 166 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 LST1O00453 97 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 COX7A2LO14548 114 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 TP53I11O14683 189 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 CHP2O43745 196 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 RPP14O95059 124 aaKnown RBP0.89□□□□□ -2.27
SMN2-208ENST00000508258 NDUFB2O95178 105 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 SOD1P00441 154 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 FUSP35637 526 aaKnown RBP eCLIP0.89□□□□□ -2.27
SMN2-208ENST00000508258 LPAR6P43657 344 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 SLCO1A2P46721 670 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 SULT1A1P50225 295 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 IDH3GP51553 393 aaPredicted RBP0.89□□□□□ -2.27
SMN2-208ENST00000508258 RAP1GDS1P52306 607 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 ZNF140P52738 457 aaPredicted RBP0.89□□□□□ -2.27
SMN2-208ENST00000508258 RBM11P57052 281 aaKnown RBP0.89□□□□□ -2.27
SMN2-208ENST00000508258 TBPL1P62380 186 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 CCL7P80098 99 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 PSG4Q00888 419 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 TNFRSF9Q07011 255 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 TMEM31Q5JXX7 168 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 FAM201AQ5SY85 155 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 HCP5Q6MZN7 132 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 C5orf46Q6UWT4 87 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 AMTNQ6UX39 209 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 HIST2H3AQ71DI3 136 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 SPATA12Q7Z6I5 190 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 CALHM3Q86XJ0 350 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 TRAPPC5Q8IUR0 188 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 MSRB3Q8IXL7 192 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 OR1L8Q8NGR8 309 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 OR11H2Q8NH07 326 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 SGMS2Q8NHU3 365 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 LHFPL5Q8TAF8 219 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 GNPNAT1Q96EK6 184 aaPredicted RBP0.89□□□□□ -2.27
SMN2-208ENST00000508258 MGLLQ99685 303 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 OR51V1Q9H2C8 321 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 FKBP14Q9NWM8 211 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 MRPL16Q9NX20 251 aaKnown RBP0.89□□□□□ -2.27
SMN2-208ENST00000508258 TAAR3PQ9P1P4 343 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 SLC22A13Q9Y226 551 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 LSM5Q9Y4Y9 91 aaKnown RBP0.89□□□□□ -2.27
SMN2-208ENST00000508258 PXMP4Q9Y6I8 212 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 PRR14LQ5THK1 2151 aa0.89□□□□□ -2.27
SMN2-208ENST00000508258 DSCAML1Q8TD84 2053 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 SHROOM3Q8TF72 1996 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 LCTP09848 1927 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 FLT4P35916 1363 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CLDN24A6NM45 220 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 A8MUN3 132 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 EEF1E1-BLOC1S5C9J1V9 151 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 E7EQL1 145 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 UBFD1O14562 309 aaKnown RBP0.88□□□□□ -2.27
SMN2-208ENST00000508258 IGHV1-69P01742 117 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 TNNC2P02585 160 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CTSGP08311 255 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 GABRA2P47869 451 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 OMPP47874 163 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 GABRA4P48169 554 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 SERPINB10P48595 397 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CDK9P50750 372 aaKnown RBP0.88□□□□□ -2.27
SMN2-208ENST00000508258 RWDD2BP57060 319 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 AP3S2P59780 193 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 SPCS3P61009 180 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 AESQ08117 197 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 STX5Q13190 355 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 SRSF6Q13247 344 aaKnown RBP0.88□□□□□ -2.27
SMN2-208ENST00000508258 PMAIP1Q13794 54 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 TNFAIP8L3Q5GJ75 292 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.88□□□□□ -2.27
SMN2-208ENST00000508258 SPOPLQ6IQ16 392 aa0.88□□□□□ -2.27
SMN2-208ENST00000508258 SMARCD3Q6STE5 483 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms