RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 C11orf52Q96A22 123 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 C5orf30Q96GV9 206 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 MRPL18Q9H0U6 180 aaKnown RBP14.86□□□□□ -0.03
NUP54-205ENST00000507257 ZFP30Q9Y2G7 519 aa14.86□□□□□ -0.03
NUP54-205ENST00000507257 MRPS17Q9Y2R5 130 aaKnown RBP14.86□□□□□ -0.03
NUP54-205ENST00000507257 SAA2-SAA4A0A096LPE2 208 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 A6NNC1 897 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 J3QW42 95 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 SIRPB1O00241 398 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 SH2D1BO14796 132 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 EGR1P18146 543 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 TMPRSS3P57727 454 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 BRWD1-AS2P59051 145 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 ZNF816Q0VGE8 651 aaPredicted RBP14.85□□□□□ -0.03
NUP54-205ENST00000507257 IGFBP7Q16270 282 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 GALMQ96C23 342 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 RNF2Q99496 336 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 OR2D2Q9H210 308 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 SPTBN5Q9NRC6 3674 aaKnown RBP14.85□□□□□ -0.03
NUP54-205ENST00000507257 ESPL1Q14674 2120 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 ARHGAP21Q5T5U3 1957 aa14.85□□□□□ -0.03
NUP54-205ENST00000507257 GRIFINA4D1Z8 144 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 NEURL1O76050 574 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 LGALS4P56470 323 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 ZNF90Q03938 601 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 GTF3C1Q12789 2109 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 TDRG1Q3Y452 100 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 COX19Q49B96 90 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 OCC1Q8TAD7 63 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 GNB1LQ9BYB4 327 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 PATZ1Q9HBE1 687 aaKnown RBP14.84□□□□□ -0.03
NUP54-205ENST00000507257 CACNA1EQ15878 2313 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 TMEM30CPA0ZSE6 113 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 GDF1P27539 372 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 FOLR3P41439 243 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 UBE2G2P60604 165 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 RPP30P78346 268 aaKnown RBP14.84□□□□□ -0.03
NUP54-205ENST00000507257 RPL19P84098 196 aaKnown RBP14.84□□□□□ -0.03
NUP54-205ENST00000507257 HLA-BQ31612 363 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 ZNF718Q3SXZ3 478 aa14.84□□□□□ -0.03
NUP54-205ENST00000507257 TRAV38-1A0A0B4J264 116 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 C17orf98A8MV24 154 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 MT-ND6P03923 174 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 REG1AP05451 166 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 CA6P23280 308 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 CBLN1P23435 193 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 CTRLP40313 264 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 SAP25Q8TEE9 199 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 SLC45A2Q9UMX9 530 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 PAM16Q9Y3D7 125 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 ARL2-SNX15V9GYD0 113 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 DOCK11Q5JSL3 2073 aa14.83□□□□□ -0.04
NUP54-205ENST00000507257 PGPEP1LA6NFU8 196 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 OOEPA6NGQ2 149 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 CDIPTO14735 213 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 DEFA4P12838 97 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 SELEP16581 610 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 TGFBR3Q03167 851 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 TRA2AQ13595 282 aaKnown RBP eCLIP14.82□□□□□ -0.04
NUP54-205ENST00000507257 PDLIM3Q53GG5 364 aaPredicted RBP14.82□□□□□ -0.04
NUP54-205ENST00000507257 SLC35E4Q6ICL7 350 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 HSD17B10Q99714 261 aaKnown RBP14.82□□□□□ -0.04
NUP54-205ENST00000507257 GP6Q9HCN6 339 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 DEPPQ9NTK1 212 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 TRGV10A0A0A0MS01 117 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 A8MXE2 369 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 ARL14EPLP0DKL9 152 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 CDKN1AP38936 164 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 OR10J3Q5JRS4 329 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 DCAF12Q5T6F0 453 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 WDR86Q86TI4 376 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 MYPOPQ86VE0 399 aaPredicted RBP14.82□□□□□ -0.04
NUP54-205ENST00000507257 BAGE3Q86Y29 109 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 BAGE2Q86Y30 109 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 Q8N976 141 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 SCCPDHQ8NBX0 429 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 VN1R17PQ8TDU5 208 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 MSL2Q9HCI7 577 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 ZNF586Q9NXT0 402 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 VCANP13611 3396 aa14.82□□□□□ -0.04
NUP54-205ENST00000507257 SCO2A0A1W2PP80 73 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 ZNF891A8MT65 544 aaPredicted RBP14.81□□□□□ -0.04
NUP54-205ENST00000507257 C12orf77C9JDV5 145 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 GPX1P07203 203 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 OR10J4P0C629 311 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 FOXG1P55316 489 aaPredicted RBP14.81□□□□□ -0.04
NUP54-205ENST00000507257 GCSAMLQ5JQS6 135 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 C9orf135Q5VTT2 229 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 C1orf174Q8IYL3 243 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 OR1L6Q8NGR2 347 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 OR52E5Q8NH55 327 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 SFXN3Q9BWM7 321 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 BOKQ9UMX3 212 aaPredicted RBP14.81□□□□□ -0.04
NUP54-205ENST00000507257 FREM1Q5H8C1 2179 aa14.81□□□□□ -0.04
NUP54-205ENST00000507257 AREGP15514 252 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 EDDM3BP56851 147 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 SPATA46Q5T0L3 261 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 WDR73Q6P4I2 378 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 TUSC5Q8IXB3 177 aa14.8□□□□□ -0.04
NUP54-205ENST00000507257 SPEM1Q8N4L4 309 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms