RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 AKIP1Q9NQ31 210 aa4.32□□□□□ -1.72
GYPB-208ENST00000507009 ZC4H2Q9NQZ6 224 aa4.32□□□□□ -1.72
GYPB-208ENST00000507009 BABAM2Q9NXR7 383 aa4.32□□□□□ -1.72
GYPB-208ENST00000507009 UBQLN2Q9UHD9 624 aa4.32□□□□□ -1.72
GYPB-208ENST00000507009 RPL36Q9Y3U8 105 aaKnown RBP4.32□□□□□ -1.72
GYPB-208ENST00000507009 LRRC42Q9Y546 428 aa4.32□□□□□ -1.72
GYPB-208ENST00000507009 KIAA1109Q2LD37 5005 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 H3BS24 57 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 J3QRK9 145 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 BET1O15155 118 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 OGG1O15527 345 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 ATP8B1O43520 1251 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 PROP1O75360 226 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 OR2J3O76001 311 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 CD3GP09693 182 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 GABRB1P18505 474 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 MYL12AP19105 171 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 ZBTB25P24278 435 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 HTR2CP28335 458 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 MECP2P51608 486 aaKnown RBP4.31□□□□□ -1.72
GYPB-208ENST00000507009 HLA-DRB3P79483 266 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 LY6G6FQ5SQ64 297 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 C10orf55Q5SWW7 151 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 ZNF57Q68EA5 555 aaPredicted RBP4.31□□□□□ -1.72
GYPB-208ENST00000507009 BTNL8Q6UX41 500 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 C19orf35Q6ZS72 473 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 TMEM61Q8N0U2 210 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 MFSD4AQ8N468 514 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 ADAD2Q8NCV1 583 aaKnown RBP4.31□□□□□ -1.72
GYPB-208ENST00000507009 RHOXF1Q8NHV9 184 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 KCNG3Q8TAE7 436 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 PHLDA1Q8WV24 401 aaPredicted RBP4.31□□□□□ -1.72
GYPB-208ENST00000507009 GGHQ92820 318 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 RNF5Q99942 180 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 TMEM59Q9BXS4 323 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 OR2D2Q9H210 308 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 FGF20Q9NP95 211 aaPredicted RBP4.31□□□□□ -1.72
GYPB-208ENST00000507009 PLEKHJ1Q9NW61 149 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 FBXL17Q9UF56 701 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 CLEC2DQ9UHP7 191 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 ZNF230Q9UIE0 474 aaPredicted RBP4.31□□□□□ -1.72
GYPB-208ENST00000507009 AK3Q9UIJ7 227 aa4.31□□□□□ -1.72
GYPB-208ENST00000507009 RBM7Q9Y580 266 aaKnown RBP4.31□□□□□ -1.72
GYPB-208ENST00000507009 RYR1P21817 5038 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 TRBV5-7A0A0A0MS05 114 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 IGHV3-35A0A0C4DH35 117 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 LOC100130705A0A1B0GUX0 176 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 DPPA5A6NC42 116 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 HMX3A6NHT5 357 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 FAM223BA6NKX1 122 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 SOCS1O15524 211 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 XRCC3O43542 346 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 SPRY2O43597 315 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 GGCTO75223 188 aaKnown RBP4.3□□□□□ -1.72
GYPB-208ENST00000507009 ACTL6BO94805 426 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 NDUFB8O95169 186 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 IGLV2-23P01705 113 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
GYPB-208ENST00000507009 CBLN1P23435 193 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 ARL3P36405 182 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 KIR2DS2P43631 304 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 RPS11P62280 158 aaKnown RBP eCLIP4.3□□□□□ -1.72
GYPB-208ENST00000507009 RPS27AP62979 156 aaKnown RBP4.3□□□□□ -1.72
GYPB-208ENST00000507009 ZNF45Q02386 682 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 TNFRSF9Q07011 255 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 INSL4Q14641 139 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 C15orf32Q32M92 178 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 VMA21Q3ZAQ7 101 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 TM4SF20Q53R12 229 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 YIF1BQ5BJH7 314 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 OR2B11Q5JQS5 317 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 RBM48Q5RL73 367 aaKnown RBP4.3□□□□□ -1.72
GYPB-208ENST00000507009 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 MOB1BQ7L9L4 216 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 FAM223AQ8IWN6 122 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 UXS1Q8NBZ7 420 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 APH1BQ8WW43 257 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 SRSF12Q8WXF0 261 aaKnown RBP4.3□□□□□ -1.72
GYPB-208ENST00000507009 TMEM68Q96MH6 324 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 DERL3Q96Q80 235 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 SLC29A1Q99808 456 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 AGMATQ9BSE5 352 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 DCUN1D5Q9BTE7 237 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 RDH8Q9NYR8 311 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 TECRQ9NZ01 308 aaKnown RBP4.3□□□□□ -1.72
GYPB-208ENST00000507009 MLXQ9UH92 298 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 FBXL7Q9UJT9 491 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 EXOSC1Q9Y3B2 195 aaKnown RBP4.3□□□□□ -1.72
GYPB-208ENST00000507009 DNAH10Q8IVF4 4471 aa4.3□□□□□ -1.72
GYPB-208ENST00000507009 HECTD4Q9Y4D8 3996 aa4.29□□□□□ -1.72
GYPB-208ENST00000507009 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.29□□□□□ -1.72
GYPB-208ENST00000507009 A0A0A6YYD4 124 aa4.29□□□□□ -1.72
GYPB-208ENST00000507009 IGKV1-6A0A0C4DH72 117 aa4.29□□□□□ -1.72
GYPB-208ENST00000507009 SRRM4A7MD48 611 aaKnown RBP4.29□□□□□ -1.72
GYPB-208ENST00000507009 RAB27BO00194 218 aa4.29□□□□□ -1.72
GYPB-208ENST00000507009 CRYZL1O95825 349 aa4.29□□□□□ -1.72
GYPB-208ENST00000507009 NAPSAO96009 420 aa4.29□□□□□ -1.72
GYPB-208ENST00000507009 CRYGBP07316 175 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms