RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 UBQLN4Q9NRR5 601 aa0.56□□□□□ -2.32
CDC42SE2-210ENST00000506929 BRWD1Q9NSI6 2320 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 GRIN2BQ13224 1484 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 IGKV3-7A0A075B6H7 116 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 A0A087WUU8 490 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 IGKV2-40A0A087WW87 121 aaPredicted RBP0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 AZIN1O14977 448 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 IGKV2D-40P01614 121 aaPredicted RBP0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 S100A9P06702 114 aaKnown RBP0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 F8A1P23610 371 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 CLDN12P56749 244 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 TMEM42Q69YG0 159 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 C7orf65Q6ZTY9 151 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 NAA40Q86UY6 237 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 SLC13A5Q86YT5 568 aaPredicted RBP0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 Q8WTZ3 238 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 IMMP2LQ96T52 175 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 MED10Q9BTT4 135 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 MROQ9BYG7 248 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 C8orf4Q9NR00 106 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 HDGFL3Q9Y3E1 203 aa0.55□□□□□ -2.32
CDC42SE2-210ENST00000506929 TMED7-TICAM2A0A0A6YYA0 188 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 LIN7AO14910 233 aaPredicted RBP0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 PLA2G10O15496 165 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 NDUFS6O75380 124 aaKnown RBP0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 NDUFB2O95178 105 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 NPYP01303 97 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 UCHL1P09936 223 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 H2BFSP57053 126 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 TMEM33P57088 247 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 GNA12Q03113 381 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 GNA13Q14344 377 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 SYCP1Q15431 976 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 USF2Q15853 346 aaPredicted RBP0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 AADACL4Q5VUY2 407 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 FAM173BQ6P4H8 233 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 SLC36A1Q7Z2H8 476 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 Q8N2B8 174 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 OTUD6BQ8N6M0 293 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 ZNF675Q8TD23 568 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 RNF133Q8WVZ7 376 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 TLCD1Q96CP7 247 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 EIF5A2Q9GZV4 153 aaKnown RBP0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 NRBP2Q9NSY0 501 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 PARVAQ9NVD7 372 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 UBAP1Q9NZ09 502 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 CHMP5Q9NZZ3 219 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 EMC3Q9P0I2 261 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 C22orf24Q9Y442 160 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 TECTAO75443 2155 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 ARFGEF3Q5TH69 2177 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 ABCC12Q96J65 1359 aa0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 DICER1Q9UPY3 1922 aaKnown RBP0.54□□□□□ -2.32
CDC42SE2-210ENST00000506929 IGHV1-18A0A0C4DH31 117 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 HMSDA8MTL9 139 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 H3BT86 120 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 COPEO14579 308 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 KLRC4O43908 158 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 PPBPP02775 128 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 KDELR2P33947 212 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 AKR1C3P42330 323 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 RPL27AP46776 148 aaKnown RBP0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 CTBP2P56545 445 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 MYL6P60660 151 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 EMX1Q04741 257 aaPredicted RBP0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 DMTNQ08495 405 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 EXOC3L4Q17RC7 722 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 ZNF705AQ6ZN79 300 aaPredicted RBP0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 GPHB5Q86YW7 130 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 C9orf163Q8N9P6 203 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 OR13C8Q8NGS7 320 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 PPWD1Q96BP3 646 aaKnown RBP0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 SMIM12Q96EX1 92 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 ADAT1Q9BUB4 502 aaKnown RBP0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 HEATR5AQ86XA9 2040 aa0.53□□□□□ -2.32
CDC42SE2-210ENST00000506929 CACNA1BQ00975 2339 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 TRAV8-1A0A0A6YYK1 113 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 A0A0D9SEW6 157 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 TRAPPC2LH3BP13 241 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 MKRN2OSH3BPM6 223 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 GOLGA8RI6L899 631 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 ATP6V1G2O95670 118 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 LGALS1P09382 135 aaKnown RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 TFPTP0C1Z6 253 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 CA5AP35218 305 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 CRATP43155 626 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 RPL28P46779 137 aaKnown RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 TBPL1P62380 186 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 PLCXD2Q0VAA5 305 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 Q1T7F1 81 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 IQCF2Q8IXL9 164 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 SPERTQ8NA61 448 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 ATP6V1C2Q8NEY4 427 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 OR10D3Q8NH80 312 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 STOML3Q8TAV4 291 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 ANP32BQ92688 251 aaKnown RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 ITFG2Q969R8 447 aa0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 CPNE2Q96FN4 548 aaPredicted RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 ZNF514Q96K75 400 aaPredicted RBP0.52□□□□□ -2.33
CDC42SE2-210ENST00000506929 TMEM109Q9BVC6 243 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms