RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ABHD5Q8WTS1 349 aa13.13□□□□□ -0.31
SNCA-209ENST00000506244 TCTEX1D2Q8WW35 142 aa13.13□□□□□ -0.31
SNCA-209ENST00000506244 SLC5A7Q9GZV3 580 aa13.13□□□□□ -0.31
SNCA-209ENST00000506244 ZFP57Q9NU63 452 aa13.13□□□□□ -0.31
SNCA-209ENST00000506244 LINC00473A8K010 186 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 ADARB2-AS1A8MUL3 147 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 CRYZL1O95825 349 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 IGLV2-14P01704 120 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 HRH1P35367 487 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
SNCA-209ENST00000506244 MRPS10P82664 201 aaKnown RBP13.12□□□□□ -0.31
SNCA-209ENST00000506244 CATR1Q13166 79 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 HIST2H2BDQ6DRA6 164 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 TMEM17Q86X19 198 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 LAX1Q8IWV1 398 aa13.12□□□□□ -0.31
SNCA-209ENST00000506244 C6orf62Q9GZU0 229 aaPredicted RBP13.12□□□□□ -0.31
SNCA-209ENST00000506244 TRAV41A0A0B4J266 112 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 FCGR3BO75015 233 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 CA2P00918 260 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 IGHG4P01861 327 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 PMP2P02689 132 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 TBPP20226 339 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 HLA-DMAP28067 261 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 RFX2P48378 723 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 CRIP2P52943 208 aaPredicted RBP13.11□□□□□ -0.31
SNCA-209ENST00000506244 CX3CL1P78423 397 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 CFHR3Q02985 330 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 TMEM267Q0VDI3 215 aaPredicted RBP13.11□□□□□ -0.31
SNCA-209ENST00000506244 DHRS11Q6UWP2 260 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 PPP1R27Q86WC6 154 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 OR6F1Q8NGZ6 308 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 ARPC1AQ92747 370 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 MOB3AQ96BX8 217 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 ZNF2Q9BSG1 426 aaPredicted RBP13.11□□□□□ -0.31
SNCA-209ENST00000506244 DCUN1D5Q9BTE7 237 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 MIXL1Q9H2W2 232 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 TAS2R8Q9NYW2 309 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 CEPT1Q9Y6K0 416 aa13.11□□□□□ -0.31
SNCA-209ENST00000506244 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
SNCA-209ENST00000506244 IGLV2-23P01705 113 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 PF4P02776 101 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 UBE2KP61086 200 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 TSPAN5P62079 268 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 NDPQ00604 133 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 ECSCRQ19T08 205 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 RNF152Q8N8N0 203 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 FCAMRQ8WWV6 532 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 CLCC1Q96S66 551 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 CCL28Q9NRJ3 127 aa13.1□□□□□ -0.31
SNCA-209ENST00000506244 RSL24D1Q9UHA3 163 aaKnown RBP13.1□□□□□ -0.31
SNCA-209ENST00000506244 NBEAL1Q6ZS30 2694 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 CTDSP2O14595 271 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 S100GP29377 79 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 SSBP1Q04837 148 aaKnown RBP13.09□□□□□ -0.31
SNCA-209ENST00000506244 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
SNCA-209ENST00000506244 OR2B11Q5JQS5 317 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 PYHIN1Q6K0P9 492 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 TMEM65Q6PI78 240 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 CMTM1Q8IZ96 169 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 MFSD4AQ8N468 514 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 TEX45Q8NA69 505 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 POC5Q8NA72 575 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 MCFD2Q8NI22 146 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 VSTM2AQ8TAG5 236 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 DIRAS2Q96HU8 199 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 AIFM2Q9BRQ8 373 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 SLIRPQ9GZT3 109 aaKnown RBP13.09□□□□□ -0.31
SNCA-209ENST00000506244 FOXA2Q9Y261 457 aaPredicted RBP13.09□□□□□ -0.31
SNCA-209ENST00000506244 WSB1Q9Y6I7 421 aa13.09□□□□□ -0.31
SNCA-209ENST00000506244 GABARAPH6UMI1 98 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 RBFOX2O43251 390 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNCA-209ENST00000506244 TNFSF12O43508 249 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 CNIH1O95406 144 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 PSMB8P28062 276 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 CD40LGP29965 261 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.32
SNCA-209ENST00000506244 IL18Q14116 193 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 FXYD3Q14802 87 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 RNASE12Q5GAN4 147 aaKnown RBP13.08□□□□□ -0.32
SNCA-209ENST00000506244 RNASE10Q5GAN6 216 aaKnown RBP13.08□□□□□ -0.32
SNCA-209ENST00000506244 VAX1Q5SQQ9 334 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 AADACL3Q5VUY0 350 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 LPCAT3Q6P1A2 487 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 ZNF818PQ6ZRF7 136 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 LYSMD2Q8IV50 215 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 KLHL30-AS1Q8NEE0 82 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 OR52I2Q8NH67 350 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 CD300LFQ8TDQ1 290 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 TPSG1Q9NRR2 321 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 MTFP1Q9UDX5 166 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 A3GALT2U3KPV4 340 aa13.08□□□□□ -0.32
SNCA-209ENST00000506244 PKD1L1Q8TDX9 2849 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 G3V318 75 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 FCN1O00602 326 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 ACTL6BO94805 426 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 HRASP01112 189 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 IFNA6P05013 189 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 RPLP1P05386 114 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms