RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PLGRKTQ9HBL7 147 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 Q9N2K0 584 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 HMG20AQ9NP66 347 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF355PQ9NSJ1 428 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PLCXD1Q9NUJ7 323 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 BABAM2Q9NXR7 383 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PTTG2Q9NZH5 202 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 IL36GQ9NZH8 169 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PEMTQ9UBM1 199 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 GHRLQ9UBU3 117 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PEF1Q9UBV8 284 aaKnown RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 PSORS1C1Q9UIG5 152 aa2.33□□□□□ -2.04
TCOF1-208ENST00000506063 RRP15Q9Y3B9 282 aaKnown RBP2.33□□□□□ -2.04
TCOF1-208ENST00000506063 IGKV1-27A0A075B6S5 117 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MEIKINA0A087WXM9 373 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 IGKV1-9A0A0C4DH69 117 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 TRBV5-5A0A0J9YX44 114 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 KBTBD11-OT1A0A1B0GTJ5 212 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 A0A1W2PPQ1 181 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 FAM90A7PA6NKC0 464 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF729A6NN14 1252 aaPredicted RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MPTX1A8MV57 137 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF705EA8MWA4 302 aaPredicted RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 FAM90A23PA8MXZ1 464 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MCRIP1C9JLW8 97 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 NPIPB11E5RHQ5 1161 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 PTGES3LE9PB15 166 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 E9PI62 339 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 AIPO00170 330 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 SLC33A1O00400 549 aaPredicted RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 FCN1O00602 326 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 PDCD5O14737 125 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 DEGS1O15121 323 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 SPINT2O43291 252 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 TXNL1O43396 289 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MRPS14O60783 128 aaKnown RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 BPNT1O95861 308 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 IL1AP01583 271 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MAS1P04201 325 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 GAPDHP04406 335 aaKnown RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 CD1AP06126 327 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 SCTP09683 121 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 DNAH10OSP0CZ25 163 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MGMTP16455 207 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 FUT3P21217 361 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 GCSHP23434 173 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 GADD45AP24522 165 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 CALRP27797 417 aaKnown RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 DUSP1P28562 367 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 C21orf33P30042 268 aaPredicted RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 GNG10P50151 68 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF137PP52743 207 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 LSAMPQ13449 338 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MMDQ15546 238 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 RAB11BQ15907 218 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 PIGYQ3MUY2 71 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 NHLRC3Q5JS37 347 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 LIPKQ5VXJ0 399 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF57Q68EA5 555 aaPredicted RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 XAF1Q6GPH4 301 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ELP2Q6IA86 826 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 GLIPR1L1Q6UWM5 242 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 GSG1LQ6UXU4 331 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ASCL4Q6XD76 172 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 Q6ZSA8 131 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF565Q8N9K5 539 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 LFNGQ8NES3 379 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 NPBQ8NG41 125 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 OR13A1Q8NGR1 328 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 OR10K1Q8NGX5 313 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 OR10X1Q8NGY0 326 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 KCNG3Q8TAE7 436 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 CD300LFQ8TDQ1 290 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 PHYHIPQ92561 330 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 GGHQ92820 318 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 FAM46BQ96A09 425 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MRPS24Q96EL2 167 aaKnown RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 NEDD4LQ96PU5 975 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 URM1Q9BTM9 101 aaKnown RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 DPCDQ9BVM2 203 aaPredicted RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 SELENOIQ9C0D9 397 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 CHMP1AQ9HD42 196 aaPredicted RBP2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ACOT13Q9NPJ3 140 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 FKBP14Q9NWM8 211 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 NDUFB11Q9NX14 153 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 CALYQ9NYX4 217 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 KCNIP1Q9NZI2 227 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 MTCH1Q9NZJ7 389 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ABRACLQ9P1F3 81 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 GNG12Q9UBI6 72 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 CLEC2DQ9UHP7 191 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 TRAPPC2LQ9UL33 140 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ING4Q9UNL4 249 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 ST3GAL6Q9Y274 331 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 A3GALT2U3KPV4 340 aa2.32□□□□□ -2.04
TCOF1-208ENST00000506063 TRAV8-7A0A075B6U6 113 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 TRBV5-7A0A0A0MS05 114 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 IGKV1-12A0A0C4DH73 117 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 A0A0U1RQV1 116 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 C13orf42A0A1B0GVH6 325 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms