RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RAB3CQ96E17 227 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 KCNK15Q9H427 330 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 FKBP14Q9NWM8 211 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 RAB22AQ9UL26 194 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 MRPS7Q9Y2R9 242 aaKnown RBP16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 TPRKBQ9Y3C4 175 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 A0A0A6YYD4 124 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 DHFRP00374 187 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 CSN3P07498 182 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 EXOSC2Q13868 293 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 LIPKQ5VXJ0 399 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 SLC16A13Q7RTY0 426 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 FBLIM1Q8WUP2 373 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 FAM3DQ96BQ1 224 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 NEURL2Q9BR09 285 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 DCUN1D5Q9BTE7 237 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 SDHAF2Q9NX18 166 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 TECRQ9NZ01 308 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 PRELID3BQ9Y3B1 194 aa16.01■□□□□ 0.15
SQSTM1-210ENST00000506042 DPPA5A6NC42 116 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 METTL21EPA6NDL7 271 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 PDCD5O14737 125 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 PROP1O75360 226 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 SLC22A5O76082 557 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 IGLV2-23P01705 113 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 GNAO1P09471 354 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 GSTT2P0CG29 244 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 GSTT2BP0CG30 244 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 HSMCR30P0CW71 290 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 RHOGP84095 191 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 PJVKQ0ZLH3 352 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 RCN1Q15293 331 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 MMD2Q8IY49 270 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 NECAP1Q8NC96 275 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 SRSF12Q8WXF0 261 aaKnown RBP16■□□□□ 0.15
SQSTM1-210ENST00000506042 TMEM203Q969S6 136 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 CABLES2Q9BTV7 478 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 AK6Q9Y3D8 172 aaKnown RBP16■□□□□ 0.15
SQSTM1-210ENST00000506042 V9GY05 133 aa16■□□□□ 0.15
SQSTM1-210ENST00000506042 TRBV6-7A0A0A0MS04 114 aa15.99■□□□□ 0.15
SQSTM1-210ENST00000506042 CRYGBP07316 175 aa15.99■□□□□ 0.15
SQSTM1-210ENST00000506042 DYRK1AQ13627 763 aa15.99■□□□□ 0.15
SQSTM1-210ENST00000506042 PRSS8Q16651 343 aa15.99■□□□□ 0.15
SQSTM1-210ENST00000506042 ADAD2Q8NCV1 583 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-210ENST00000506042 VSTM2AQ8TAG5 236 aa15.99■□□□□ 0.15
SQSTM1-210ENST00000506042 PLEKHA3Q9HB20 300 aa15.99■□□□□ 0.15
SQSTM1-210ENST00000506042 ACOT13Q9NPJ3 140 aa15.99■□□□□ 0.15
SQSTM1-210ENST00000506042 TENM2Q9NT68 2774 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 CRYZL1O95825 349 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 FCGR3AP08637 254 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 CD36P16671 472 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 CALRP27797 417 aaKnown RBP15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 ARFRP1Q13795 201 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 GUCA2BQ16661 112 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 ANKRD55Q3KP44 614 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 C2orf76Q3KRA6 126 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 IL34Q6ZMJ4 242 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 CYYR1Q96J86 154 aa15.98■□□□□ 0.15
SQSTM1-210ENST00000506042 IGKV1-6A0A0C4DH72 117 aa15.97■□□□□ 0.15
SQSTM1-210ENST00000506042 TMEM50BP56557 158 aa15.97■□□□□ 0.15
SQSTM1-210ENST00000506042 CDK10Q15131 360 aa15.97■□□□□ 0.15
SQSTM1-210ENST00000506042 HIPK2Q9H2X6 1198 aa15.97■□□□□ 0.15
SQSTM1-210ENST00000506042 GAR1Q9NY12 217 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-210ENST00000506042 ZNF257Q9Y2Q1 563 aa15.97■□□□□ 0.15
SQSTM1-210ENST00000506042 FOXI3A8MTJ6 420 aaPredicted RBP15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 GGCTO75223 188 aaKnown RBP15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 CTXN2P0C2S0 81 aa15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 APELAP0DMC3 54 aa15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 LINC00205P59089 165 aa15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 IGSF11Q5DX21 431 aa15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 THAP7Q9BT49 309 aaPredicted RBP15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 CCDC90BQ9GZT6 254 aa15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 AKIP1Q9NQ31 210 aa15.96■□□□□ 0.15
SQSTM1-210ENST00000506042 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 OR11H12B2RN74 326 aa15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 MYL9P24844 172 aa15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 MLLT11Q13015 90 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 CD300EQ496F6 205 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 FAM106AQ4KMX7 169 aa15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 OGFRL1Q5TC84 451 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 OR4A47Q6IF82 309 aa15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 OR10R2Q8NGX6 335 aa15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 AIFM2Q9BRQ8 373 aa15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 SRD5A3Q9H8P0 318 aa15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 LSM2Q9Y333 95 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-210ENST00000506042 RGS10O43665 173 aa15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 TRBV12-3P01733 135 aa15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 RAB6AP20340 208 aa15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 DUTP33316 252 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 CLDN12P56749 244 aa15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 SSBP2P81877 361 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 PLAC9Q5JTB6 97 aa15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 LAIR2Q6ISS4 152 aa15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 KCTD9Q7L273 389 aa15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 TTC9CQ8N5M4 171 aa15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 ZNF230Q9UIE0 474 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-210ENST00000506042 A0A075B6Q4 140 aa15.93■□□□□ 0.14
SQSTM1-210ENST00000506042 LGALS9O00182 355 aa15.93■□□□□ 0.14
SQSTM1-210ENST00000506042 BMPR1BO00238 502 aa15.93■□□□□ 0.14
SQSTM1-210ENST00000506042 CASQ2O14958 399 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms