RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZNF702PQ9H963 129 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 BEX1Q9HBH7 125 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 AKIP1Q9NQ31 210 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 PRELID3BQ9Y3B1 194 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 STAB1Q9NY15 2570 aa9.47□□□□□ -0.89
PDLIM5-208ENST00000504489 NCBP2LA6PVI3 153 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 DISC1C4P0D8 188 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 GPR31O00270 319 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 NDUFA3O95167 84 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 IGKV1-16P04430 117 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 RPL30P62888 115 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 CBX3Q13185 183 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 KLF9Q13886 244 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 ABCA11PQ4W5N1 156 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 TMEM177Q53S58 311 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 TOMM5Q8N4H5 51 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 FAM71E2Q8N5Q1 922 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 LINC01006Q8NI28 216 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 FLYWCH2Q96CP2 140 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 RBMXL1Q96E39 390 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 RSRP1Q9BUV0 290 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 LIN7CQ9NUP9 197 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 SLC2A8Q9NY64 477 aa9.46□□□□□ -0.9
PDLIM5-208ENST00000504489 CLPSL1A2RUU4 121 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 NBR2O15453 112 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 MDKP21741 143 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 CNTFRP26992 372 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 FAUP35544 74 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 ECI1P42126 302 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 KIR2DS2P43631 304 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 LGALS7P47929 136 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 RPS16P62249 146 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 CATR1Q13166 79 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 MMDQ15546 238 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 BAK1Q16611 211 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 AWAT1Q58HT5 328 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 FAAP20Q6NZ36 180 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 Q6ZS46 218 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 CMTM1Q8IZ96 169 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 SLC38A6Q8IZM9 456 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 OR2T6Q8NHC8 308 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 TCTEX1D2Q8WW35 142 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 ZNF486Q96H40 463 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 GPHA2Q96T91 129 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 TSNAXQ99598 290 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 PRRT1Q99946 306 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 RASL11BQ9BPW5 248 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 TENM1Q9UKZ4 2725 aa9.45□□□□□ -0.9
PDLIM5-208ENST00000504489 RRHO14718 337 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 SHOXO15266 292 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 RBFOX2O43251 390 aaKnown RBP eCLIP9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 TNFSF12O43508 249 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 FCGR3BO75015 233 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 PGLYRP1O75594 196 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 SPDEFO95238 335 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 CRYZL1O95825 349 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 S100GP29377 79 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 BRWD1-AS2P59051 145 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 SURF2Q15527 256 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 C5orf64Q2M2E5 130 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 SCGB2B2Q4G0G5 96 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 TRIQKQ629K1 86 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 TCTEX1D1Q8N7M0 179 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 OSR1Q8TAX0 266 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 ZFAND1Q8TCF1 268 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 MRGPRFQ96AM1 343 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 HRASLSQ9HDD0 168 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 SERTAD4Q9NUC0 356 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 KIAA1456Q9P272 454 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 SCP2D1Q9UJQ7 156 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 RNF114Q9Y508 228 aa9.44□□□□□ -0.9
PDLIM5-208ENST00000504489 SH2D7A6NKC9 451 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 IGLV2-23P01705 113 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 IGHG2P01859 326 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 HLA-DRB1P01911 266 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 IL7P13232 177 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 PGAM2P15259 253 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 CD40LGP29965 261 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 INPP1P49441 399 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 PPP5CP53041 499 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 PROK1P58294 105 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 RND3P61587 244 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 PSG5Q15238 335 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 PHLDA2Q53GA4 152 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 ZNF57Q68EA5 555 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 OR51S1Q8NGJ8 323 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 OR13C8Q8NGS7 320 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 OR4S2Q8NH73 311 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 MARCH1Q8TCQ1 289 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 CD300LFQ8TDQ1 290 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 HARBI1Q96MB7 349 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 CCDC32Q9BV29 185 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 FBXL15Q9H469 300 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 MCUBQ9NWR8 336 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 SIGLEC9Q9Y336 463 aa9.43□□□□□ -0.9
PDLIM5-208ENST00000504489 SRRM4A7MD48 611 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 PEX14O75381 377 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 RLN1P04808 185 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 CRYGBP07316 175 aa9.42□□□□□ -0.9
PDLIM5-208ENST00000504489 CTSDP07339 412 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 434.7 ms