RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 LSM10Q969L4 123 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 RAB39BQ96DA2 213 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 C1orf159Q96HA4 380 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 AJUBAQ96IF1 538 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 HYLS1Q96M11 299 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 NABP2Q9BQ15 211 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 RANBP3Q9H6Z4 567 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 UNKLQ9H9P5 680 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 LPAR2Q9HBW0 351 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 GSKIPQ9P0R6 139 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 TNFSF18Q9UNG2 199 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 KPTNQ9Y664 436 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 ZNF469Q96JG9 3925 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 FXYD6-FXYD2A0A087WZ82 144 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1W2PPI3 338 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 MSGN1A6NI15 193 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 SRRM4A7MD48 611 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 HMSDA8MTL9 139 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 K7EPK0 472 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 ARPC5O15511 151 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 FOXH1O75593 365 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 NXPH3O95157 252 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM50AO95807 157 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 KRASP01116 189 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 IFNA21P01568 189 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 OR9G9P0C7N8 305 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 SLC25A6P12236 298 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 EPHA1P21709 976 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 DVL1P1P54792 670 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 DSCR9P59020 149 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 CYCSP99999 105 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 CXorf66Q5JRM2 361 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 PRSS54Q6PEW0 395 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM65Q6PI78 240 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 C1orf122Q6ZSJ8 110 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 LHFPL4Q7Z7J7 247 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 VKORC1L1Q8N0U8 176 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 LRRC75A-AS1Q8N1F1 130 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 DYNAPQ8N1N2 210 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 FAM71E2Q8N5Q1 922 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 OR5AN1Q8NGI8 311 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 OR10X1Q8NGY0 326 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 OR1S1Q8NH92 325 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 C17orf50Q8WW18 174 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM186Q96B77 213 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 R3HDM4Q96D70 268 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 MBD6Q96DN6 1003 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 S1PR3Q99500 378 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 HEXA-AS1Q9H8Q6 139 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 PLEKHA2Q9HB19 425 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 CACNG5Q9UF02 275 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 HSPB11Q9Y547 144 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 MMP24Q9Y5R2 645 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 INSIG2Q9Y5U4 225 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 SVEP1Q4LDE5 3571 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 TNCP24821 2201 aa5.58□□□□□ -1.52
TOPBP1-203ENST00000503464 NAV2Q8IVL1 2488 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 TRAV3A0A0B4J244 114 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1B0GU03 582 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1W2PRD5 423 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1W2PRF3 423 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1W2PRM7 423 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 MARCH11A6NNE9 402 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 RNF223E7ERA6 249 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 DEDDO75618 318 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 CRYZL1O95825 349 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 SCGB1D2O95969 90 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 HPRT1P00492 218 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 IL6RP08887 468 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 SLC25A16P16260 332 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 PAX6P26367 422 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 KIR2DS2P43631 304 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 AKR1C2P52895 323 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 S100A10P60903 97 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 ID3Q02535 119 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 PAX8Q06710 450 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 SMCO1Q147U7 214 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 POU2AF1Q16633 256 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 MRGPRG-AS1Q2M3A8 158 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 AARDQ4LEZ3 155 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 Q5PR19 223 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 TPTE2P1Q5T6R2 138 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 FOXRED2Q8IWF2 684 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 PDZD9Q8IXQ8 264 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 OR13D1Q8NGV5 346 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 OR4S2Q8NH73 311 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 CFHR4Q92496 578 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 BSCL2Q96G97 398 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 ADTRPQ96IZ2 230 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 RITA1Q96K30 269 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 MAGT1Q9H0U3 335 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 SLC35D1Q9NTN3 355 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 COMMD9Q9P000 198 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 LSM5Q9Y4Y9 91 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 POMT1Q9Y6A1 747 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 UNC79Q9P2D8 2635 aa5.57□□□□□ -1.52
TOPBP1-203ENST00000503464 FASNP49327 2511 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 AKAP9Q99996 3911 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 IGHV3-72A0A0B4J1Y9 119 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 IGHV1-3A0A0C4DH29 117 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms