RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 HLA-DQA1P01909 254 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 NUBP1P53384 320 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 MIC13Q5XKP0 118 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 NYNRINQ9P2P1 1898 aaKnown RBP13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 CACNA1EQ15878 2313 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 ANK1P16157 1881 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 TGIF2-C20orf24A0A0A6YYL0 155 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 IFITM10A6NMD0 228 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 GPR6P46095 362 aaPredicted RBP13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 RPL8P62917 257 aaKnown RBP13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 SCNM1Q9BWG6 230 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 HSPE1P61604 102 aaKnown RBP13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 ITLN1Q8WWA0 313 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 GPHA2Q96T91 129 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 SIP14410 1827 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 MARCH11A6NNE9 402 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 RPL7P18124 248 aaKnown RBP13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 NPBWR2P48146 333 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 ZNF658BQ4V348 819 aaPredicted RBP13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 PRNTQ86SH4 94 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 HIST1H2BAQ96A08 127 aa13.82□□□□□ -0.2
HMGXB3-202ENST00000503427 A0A0B4J293 547 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 COL5A1-AS1Q5SY13 56 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 OR8A1Q8NGG7 326 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 TM2D1Q9BX74 207 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 CIDEAO60543 219 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 PTGDSP41222 190 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 CDX1P47902 265 aaPredicted RBP13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 KCNMB1Q16558 191 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 SCGB1D4Q6XE38 83 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 PSMG3Q9BT73 122 aaPredicted RBP13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 AKIRIN1Q9H9L7 192 aaPredicted RBP13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 TMEM140Q9NV12 185 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 CALYQ9NYX4 217 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 JPT1Q9UK76 154 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 C17orf51A8MQB3 221 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 ZNHIT1O43257 154 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 ERVFRD-1P60508 538 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 CALHM1Q8IU99 346 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 LOC102723996A0A087X1L8 192 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 NDUFA2O43678 99 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 ZNF735P0CB33 412 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 Q6ZT83 130 aa13.81□□□□□ -0.2
HMGXB3-202ENST00000503427 IGHV3-21A0A0B4J1V1 117 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 ZG16O60844 167 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 RFPL3SP0C7P2 107 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 CLDN18P56856 261 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 FADS6Q8N9I5 356 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 SIGLEC12Q96PQ1 595 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 MRPL37Q9BZE1 423 aaKnown RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 ADRA2AP08913 450 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 AGAP20933 346 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 GLIPR1P48060 266 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 LRRC75BQ2VPJ9 315 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 SLC25A53Q5H9E4 307 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 MMD2Q8IY49 270 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 MYOZ3Q8TDC0 251 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 RBM14Q96PK6 669 aaKnown RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 TMEM208Q9BTX3 173 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 MRPS18CQ9Y3D5 142 aaKnown RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 CEBPDP49716 269 aaPredicted RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 ZNF430Q9H8G1 570 aaPredicted RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 NAT2P11245 290 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 FHITP49789 147 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 SLC35B1P78383 322 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 RPL24P83731 157 aaKnown RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 SLC35E4Q6ICL7 350 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 KLF14Q8TD94 323 aaPredicted RBP13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 TP53RKQ96S44 253 aa13.8□□□□□ -0.2
HMGXB3-202ENST00000503427 PRR19A6NJB7 356 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 COTL1Q14019 142 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 NRN1LQ496H8 165 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 ZNF385CQ66K41 422 aaPredicted RBP13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 DGAT2L7PQ6IED9 249 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 NEUROG3Q9Y4Z2 214 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 SCN2AQ99250 2005 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 TMSB15BA0A087X1C1 80 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 A8MXK9 166 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 RHBDL1O75783 438 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 CD40P25942 277 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 OR4B1Q8NGF8 309 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 IDI2-AS1Q9NZ38 188 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 ZFP30Q9Y2G7 519 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 HOXA4Q00056 320 aaPredicted RBP13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 GALNT14Q96FL9 552 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 DCAF16Q9NXF7 216 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 THSD7BQ9C0I4 1608 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 S1PR2O95136 353 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 ABLIM2Q6H8Q1 611 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 ATG101Q9BSB4 218 aa13.79□□□□□ -0.2
HMGXB3-202ENST00000503427 ZIC3O60481 467 aa13.78□□□□□ -0.2
HMGXB3-202ENST00000503427 KBTBD11O94819 623 aa13.78□□□□□ -0.2
HMGXB3-202ENST00000503427 SHISA5Q8N114 240 aa13.78□□□□□ -0.2
HMGXB3-202ENST00000503427 UMODP07911 640 aa13.78□□□□□ -0.2
HMGXB3-202ENST00000503427 WDR25Q64LD2 544 aaPredicted RBP13.78□□□□□ -0.2
HMGXB3-202ENST00000503427 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
HMGXB3-202ENST00000503427 DPF1Q92782 380 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms