RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CMYA5Q8N3K9 4069 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 SRRM4A7MD48 611 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 FCN1O00602 326 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 SHOXO15266 292 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 ATP6V0E1O15342 81 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 SLC25A17O43808 307 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 VDAC1P21796 283 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 FXYD4P59646 89 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 HERV-K104P61576 105 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 CX3CL1P78423 397 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 MRPS10P82664 201 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 NDPQ00604 133 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 ZNF562Q6V9R5 426 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 MFSD4AQ8N468 514 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 OR6F1Q8NGZ6 308 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 RABL2AQ9UBK7 228 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 KLK11Q9UBX7 282 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 MTFP1Q9UDX5 166 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 RABL2BQ9UNT1 228 aa14.32□□□□□ -0.12
PDLIM7-209ENST00000503346 FCGR3BO75015 233 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 CRYZL1O95825 349 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 CRIP2P52943 208 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 ACTBL2Q562R1 376 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 VAX1Q5SQQ9 334 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 PYHIN1Q6K0P9 492 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 TEX38Q6PEX7 206 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 MCFD2Q8NI22 146 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 TCTEX1D2Q8WW35 142 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 BORCS5Q969J3 196 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 DIRAS2Q96HU8 199 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 PARP11Q9NR21 331 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 TPSG1Q9NRR2 321 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 TAS2R8Q9NYW2 309 aa14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 TET2Q6N021 2002 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-209ENST00000503346 GABARAPH6UMI1 98 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 IGHG4P01861 327 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 PPIFP30405 207 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 GNRHRP30968 328 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 BRWD1-AS2P59051 145 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 UBE2KP61086 200 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 FOXE3Q13461 319 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 RNASE12Q5GAN4 147 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 ZNF818PQ6ZRF7 136 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 PPP1R27Q86WC6 154 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 TMEM17Q86X19 198 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 RNF152Q8N8N0 203 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 OR4F17Q8NGA8 305 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 FAM110DQ8TAY7 271 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 FCAMRQ8WWV6 532 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 OR4F4Q96R69 305 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 CLCC1Q96S66 551 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 ZFP57Q9NU63 452 aa14.3□□□□□ -0.12
PDLIM7-209ENST00000503346 TRAV41A0A0B4J266 112 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 CTDSPLO15194 276 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 TNFSF12O43508 249 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 CA2P00918 260 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 ELANEP08246 267 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 KIR2DS2P43631 304 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 SSBP1Q04837 148 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 VMA21Q3ZAQ7 101 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 C19orf54Q5BKX5 351 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 OR2B11Q5JQS5 317 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 TEX45Q8NA69 505 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 OR4S2Q8NH73 311 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 GPHA2Q96T91 129 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 DCUN1D5Q9BTE7 237 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 FXYD6Q9H0Q3 95 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 FBXO7Q9Y3I1 522 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 WSB1Q9Y6I7 421 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 A3GALT2U3KPV4 340 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 MGAM2Q2M2H8 2515 aa14.29□□□□□ -0.12
PDLIM7-209ENST00000503346 VWFP04275 2813 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 A0A1W2PRX2 142 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 G3V318 75 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 EGR2P11161 476 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 TBPP20226 339 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 TNFSF8P32971 234 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 TSPAN5P62079 268 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 RPL23AP62750 156 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 SSBP2P81877 361 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 DGCR2P98153 550 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 IL18Q14116 193 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 KHDC1LQ5JSQ8 128 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 TMEM229BQ8NBD8 167 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 MINDY2Q8NBR6 621 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 PKD1L1Q8TDX9 2849 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 SMIM4Q8WVI0 70 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 R3HDM4Q96D70 268 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 SOSTQ9BQB4 213 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 NUBP2Q9Y5Y2 271 aa14.28□□□□□ -0.12
PDLIM7-209ENST00000503346 M0QYG6 137 aa14.27□□□□□ -0.13
PDLIM7-209ENST00000503346 RBFOX2O43251 390 aaKnown RBP eCLIP14.27□□□□□ -0.138e-13■■■□□ 18.5
PDLIM7-209ENST00000503346 CD3DP04234 171 aa14.27□□□□□ -0.13
PDLIM7-209ENST00000503346 PSMB8P28062 276 aa14.27□□□□□ -0.13
PDLIM7-209ENST00000503346 PJVKQ0ZLH3 352 aa14.27□□□□□ -0.13
PDLIM7-209ENST00000503346 CATR1Q13166 79 aa14.27□□□□□ -0.13
PDLIM7-209ENST00000503346 FXYD3Q14802 87 aa14.27□□□□□ -0.13
PDLIM7-209ENST00000503346 MRGPRG-AS1Q2M3A8 158 aa14.27□□□□□ -0.13
PDLIM7-209ENST00000503346 RNASE10Q5GAN6 216 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms