RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 R3HDM4Q96D70 268 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 WDR89Q96FK6 387 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 C1orf159Q96HA4 380 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 RNF5Q99942 180 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 SIRPDQ9H106 197 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 DPM3Q9P2X0 92 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 NSG2Q9Y328 171 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 TBL2Q9Y4P3 447 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 INSIG2Q9Y5U4 225 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 POMT1Q9Y6A1 747 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 CHD6Q8TD26 2715 aa6.62□□□□□ -1.35
TOPBP1-202ENST00000503338 TRAV14DV4A0A0A6YYC5 116 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 ODF3BA8MYP8 253 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 G3V3Q6 166 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 H0YJW9 148 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 L7N2F9 121 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 GPR137BO60478 399 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 RAMP3O60896 148 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 PITX3O75364 302 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 CRYZL1O95825 349 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 KRASP01116 189 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 IGKV1-39P01597 117 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 IGKV1-5P01602 117 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 MBPP02686 304 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 IGKV1D-39P04432 117 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 MSMBP08118 114 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 FGF2P09038 288 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 P0C879 139 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 COX7A1P24310 79 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 LGALS7P47929 136 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 UBE2E1P51965 193 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 BRWD1-AS2P59051 145 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 S100A10P60903 97 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 ID3Q02535 119 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 PAX8Q06710 450 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 RAB32Q13637 225 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 TMEM177Q53S58 311 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 OR2B11Q5JQS5 317 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 ACOT7LQ6ZUV0 252 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 FAM71E2Q8N5Q1 922 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 DMBX1Q8NFW5 382 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 OR11H4Q8NGC9 324 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 OR4P4Q8NGL7 312 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 OR4A5Q8NH83 315 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 LHX4Q969G2 390 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 FLYWCH2Q96CP2 140 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 RAB40CQ96S21 281 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 NABP2Q9BQ15 211 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 TMUB1Q9BVT8 246 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 MRPL20Q9BYC9 149 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 MFFQ9GZY8 342 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 SIRT7Q9NRC8 400 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 FKBP11Q9NYL4 201 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 MBD2Q9UBB5 411 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 CACNG5Q9UF02 275 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 WASHC3Q9Y3C0 194 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 DOPEY2Q9Y3R5 2298 aa6.61□□□□□ -1.35
TOPBP1-202ENST00000503338 SPG11Q96JI7 2443 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 FLNCQ14315 2725 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 COL12A1Q99715 3063 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 FAM157AC9JC47 383 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 LY6LH3BQJ8 138 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 H7C2Y5 167 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 J3QLI3 93 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 K7EPK0 472 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 SHOXO15266 292 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 ARPC5O15511 151 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 SCAF4O95104 1147 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 SCGB1D2O95969 90 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 HOXB4P17483 251 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 CD1BP29016 333 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 G6PCP35575 357 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 P2RY1P47900 373 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 NKX2-5P52952 324 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 TAS2R30P59541 319 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 KRTAP10-9P60411 292 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 VAMP2P63027 116 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 AARDQ4LEZ3 155 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 MIDNQ504T8 468 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 Q5BKY6 102 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 Q5PR19 223 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 UTF1Q5T230 341 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 TPTE2P1Q5T6R2 138 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 GPR157Q5UAW9 335 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 ZNF429Q86V71 674 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 FOXRED2Q8IWF2 684 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 C9orf62Q8N4C0 152 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 LINC01356Q8N9X3 169 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 OR52E5Q8NH55 327 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 OR4A16Q8NH70 328 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 DCUN1D4Q92564 292 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 MALSU1Q96EH3 234 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 RHOVQ96L33 236 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 CIB3Q96Q77 187 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 GON7Q9BXV9 100 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 MMP26Q9NRE1 261 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 BET1LQ9NYM9 111 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 PRNDQ9UKY0 176 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 TNFSF18Q9UNG2 199 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms