RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CNIH1O95406 144 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 IGLV2-23P01705 113 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 SDC2P34741 201 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 INSL3P51460 131 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 TPPP2P59282 170 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 PITPNAQ00169 270 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 MXD1Q05195 221 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 TMEM177Q53S58 311 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 VAX1Q5SQQ9 334 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 HACD4Q5VWC8 232 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 BVESQ8NE79 360 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 LGALS14Q8TCE9 139 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 NUDCD2Q8WVJ2 157 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 DCUN1D4Q92564 292 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 DLX4Q92988 240 aaPredicted RBP6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 C5orf30Q96GV9 206 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 ADTRPQ96IZ2 230 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 MS4A10Q96PG2 267 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 PRR25Q96S07 402 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 ST6GALNAC5Q9BVH7 336 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 DCSTAMPQ9H295 470 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 RNF167Q9H6Y7 350 aa6.56□□□□□ -1.36
HMGXB4-207ENST00000498212 IGHV4OR15-8A0A075B7B6 117 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 A0A087WW49 117 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 LOC100506127A0A0U1RQW1 187 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 TMEM235A6NFC5 223 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 LINC00473A8K010 186 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 H3BUA1 57 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 J3QRK9 145 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 IGHV3-11P01762 117 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 TRGV3P03979 118 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 HSPB1P04792 205 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 CRYGBP07316 175 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 CTXN2P0C2S0 81 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 CD36P16671 472 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 DUTP33316 252 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 SLURP1P55000 103 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 SCAND1P57086 179 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 GNG2P59768 71 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 SSBP2P81877 361 aaPredicted RBP6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 PJVKQ0ZLH3 352 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 NEDD8Q15843 81 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 VMA21Q3ZAQ7 101 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 C11orf87Q6NUJ2 197 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 ZNF429Q86V71 674 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 ZNF645Q8N7E2 425 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 DDB2Q92466 427 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 ZNF355PQ9NSJ1 428 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 RHBDL2Q9NX52 303 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 ZNF256Q9Y2P7 627 aaPredicted RBP6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 OR2W1Q9Y3N9 320 aa6.55□□□□□ -1.36
HMGXB4-207ENST00000498212 SRRM4A7MD48 611 aaKnown RBP6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 SAP30O75446 220 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 SLC22A5O76082 557 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 LY86O95711 162 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 CRYZL1O95825 349 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 HLA-DQB1P01920 261 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 CLEC2LP0C7M8 214 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 NFYAP23511 347 aaPredicted RBP6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 UBE2KP61086 200 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 TNXAQ16473 311 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 KCTD21Q4G0X4 260 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 IDNKQ5T6J7 187 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 ACSM6Q6P461 480 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 CNIH2Q6PI25 160 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 TEX45Q8NA69 505 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 POC5Q8NA72 575 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 OR5T1Q8NG75 326 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 OSR1Q8TAX0 266 aaPredicted RBP6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 RHOVQ96L33 236 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 TMEM68Q96MH6 324 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 PHB2Q99623 299 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 LSM4Q9Y4Z0 139 aaKnown RBP6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 ETV7Q9Y603 341 aa6.54□□□□□ -1.36
HMGXB4-207ENST00000498212 A0A0G2JLM5 398 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 C13orf42A0A1B0GVH6 325 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 SSX5O60225 188 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 FCGR3BO75015 233 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 TUSC2O75896 110 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 MRGPRG-AS1Q2M3A8 158 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 TIMM50Q3ZCQ8 353 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 IDO2Q6ZQW0 420 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 KCTD9Q7L273 389 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 BEST4Q8NFU0 473 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 OR5H6Q8NGV6 325 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 ACOT12Q8WYK0 555 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 SLC25A38Q96DW6 304 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 DCUN1D5Q9BTE7 237 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 COA4Q9NYJ1 87 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 ANXA10Q9UJ72 324 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 SPATA2Q9UM82 520 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 MRPS7Q9Y2R9 242 aaKnown RBP6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 RBMX2Q9Y388 322 aaKnown RBP6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 PRELID3BQ9Y3B1 194 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 TNCP24821 2201 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 SORL1Q92673 2214 aa6.53□□□□□ -1.36
HMGXB4-207ENST00000498212 TRAV18A0A075B6X5 111 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 A0A0A6YYH2 397 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 IGKV1D-13A0A0B4J2D9 117 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 ANKRD34BA5PLL1 514 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms