RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	NSD1	Q96L73	2696 aa	Predicted RBP	11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852	MDFIC2	A0A1B0GVS7	189 aa		11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852	INAFM1	C9JVW0	142 aa		11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852		H0YJW9	148 aa		11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852	PFDN1	O60925	122 aa		11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852	BRWD1-AS2	P59051	145 aa		11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852	MOB3B	Q86TA1	216 aa		11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852	ZNF48	Q96MX3	618 aa	Predicted RBP	11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852	TP53RK	Q96S44	253 aa		11.23	□□□□□ -0.61
ATPAF2-208	ENST00000496852	IGHV3-72	A0A0B4J1Y9	119 aa		11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	FAM90A9P	A6NNJ1	464 aa		11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	FAM25E	A8MYX2	175 aa		11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	GOSR2	O14653	212 aa		11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	DUS4L	O95620	317 aa	Known RBP	11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	SERPINE2	P07093	398 aa		11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	DYNLT3	P51808	116 aa		11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	ARHGDIB	P52566	201 aa		11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	RRAS2	P62070	204 aa	Predicted RBP	11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	FCN2	Q15485	313 aa		11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	LIN7C	Q9NUP9	197 aa	Known RBP	11.22	□□□□□ -0.61
ATPAF2-208	ENST00000496852	FN1	P02751	2386 aa	Known RBP	11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	CD1B	P29016	333 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	MC5R	P33032	325 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	TAGLN	Q01995	201 aa	Known RBP	11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	TMEM187	Q14656	261 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	AANAT	Q16613	207 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	ANKRD55	Q3KP44	614 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	ZNF695	Q8IW36	515 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	MITD1	Q8WV92	249 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	RBMXL1	Q96E39	390 aa	Known RBP	11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	GALNT14	Q96FL9	552 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	SLC35D1	Q9NTN3	355 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	MGAT4C	Q9UBM8	478 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	PRELID3B	Q9Y3B1	194 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	WASHC3	Q9Y3C0	194 aa		11.21	□□□□□ -0.61
ATPAF2-208	ENST00000496852	C13orf42	A0A1B0GVH6	325 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	HMX3	A6NHT5	357 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852		H0Y980	276 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	FCGR3B	O75015	233 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	VENTX	O95231	258 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	APOA2	P02652	100 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	HOXB5	P09067	269 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SRD5A1	P18405	259 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	BRS3	P32247	399 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RAB13	P51153	203 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	LRRC75B	Q2VPJ9	315 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	PDPN	Q86YL7	162 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SPAG16	Q8N0X2	631 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	LGI3	Q8N145	548 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TCTEX1D1	Q8N7M0	179 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	PIFO	Q8TCI5	191 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SSX3	Q99909	188 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	MTOR	P42345	2549 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TET2	Q6N021	2002 aa	Predicted RBP	11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CCS	O14618	274 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RAMP3	O60896	148 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SIX6	O95475	246 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SNRNP70	P08621	437 aa	Known RBP	11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RRAS	P10301	218 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CD24	P25063	80 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	KIR2DS2	P43631	304 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	LPAR6	P43657	344 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	EBI3	Q14213	229 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	ZNF585B	Q52M93	769 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	FBLN7	Q53RD9	439 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TMEM268	Q5VZI3	342 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852		Q6YL49	198 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	LIAT1	Q6ZQX7	453 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	THNSL2	Q86YJ6	484 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RNASE11	Q8TAA1	199 aa	Known RBP	11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	GLYATL2	Q8WU03	294 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CHIA	Q9BZP6	476 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TMEM222	Q9H0R3	208 aa		11.2	□□□□□ -0.62
ATPAF2-208	ENST00000496852	C5orf51	A6NDU8	294 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852		H7C2Y5	167 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	ADAP1	O75689	374 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	B3GALNT1	O75752	331 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IGKV1D-33	P01593	117 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IGKV1-33	P01594	117 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IGKV1-16	P04430	117 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	UCP1	P25874	307 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CD83	Q01151	205 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SCGB2A2	Q13296	93 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RTL8B	Q17RB0	113 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	AKAP14	Q86UN6	197 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	PDCD10	Q9BUL8	212 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	PLXNB1	O43157	2135 aa		11.19	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TNC	P24821	2201 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852		H3BUX3	64 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CRLF1	O75462	422 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CCNK	O75909	580 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CRYZL1	O95825	349 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IFNA21	P01568	189 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RPA2	P15927	270 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IER3	P46695	156 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SRPX	P78539	464 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	C2orf68	Q2NKX9	166 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms