RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 CRYGBP07316 175 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 OR5H8P0DN80 308 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 RORCP51449 518 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 GNB1P62873 340 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 EIF4EBP1Q13541 118 aaPredicted RBP13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 RTL8BQ17RB0 113 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 MRGPRG-AS1Q2M3A8 158 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 TMEM177Q53S58 311 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 RNASE12Q5GAN4 147 aaKnown RBP13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 ZNF660Q6AZW8 331 aaPredicted RBP13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 IDO2Q6ZQW0 420 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 KCTD9Q7L273 389 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 SNX29P2Q8IUI4 249 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 RNF152Q8N8N0 203 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 GRPEL2Q8TAA5 225 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 RAX2Q96IS3 184 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 OR5B12Q96R08 314 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 GNB4Q9HAV0 340 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 ZFP57Q9NU63 452 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 NECAP2Q9NVZ3 263 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 TAS2R8Q9NYW2 309 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 ANAPC10Q9UM13 185 aa13.7□□□□□ -0.22
RHBDD3-207ENST00000496342 PPYP01298 95 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 PMP2P02689 132 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 CBX5P45973 191 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 KIAA0141Q14154 515 aaPredicted RBP13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 CDK10Q15131 360 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 PPP1R27Q86WC6 154 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 LFNGQ8NES3 379 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 OR5AP2Q8NGF4 316 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 ARPC1AQ92747 370 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 ADTRPQ96IZ2 230 aa13.69□□□□□ -0.22
RHBDD3-207ENST00000496342 FAM25AB3EWG3 89 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 FAM25CB3EWG5 89 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 FAM25GB3EWG6 89 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 APOA1P02647 267 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 RFX2P48378 723 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 CRIP2P52943 208 aaPredicted RBP13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 RAB25P57735 213 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 TAGLNQ01995 201 aaKnown RBP13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 FXYD3Q14802 87 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 TMEM17Q86X19 198 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 MINDY2Q8NBR6 621 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 WFDC9Q8NEX5 89 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 MYOZ3Q8TDC0 251 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 TCTEX1D2Q8WW35 142 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 P2RX4Q99571 388 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 EHFQ9NZC4 300 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 NUBP2Q9Y5Y2 271 aa13.68□□□□□ -0.22
RHBDD3-207ENST00000496342 APELAP0DMC3 54 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 RRASP10301 218 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 PRSS3P35030 304 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 CDX1P47902 265 aaPredicted RBP13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 BRWD1-AS2P59051 145 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 DEFA5Q01523 94 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 CBX3Q13185 183 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 PDLIM3Q53GG5 364 aaPredicted RBP13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 ZNF562Q6V9R5 426 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 VKORC1L1Q8N0U8 176 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 ACOT12Q8WYK0 555 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 SLC5A7Q9GZV3 580 aa13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 ALX4Q9H161 411 aaPredicted RBP13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 FOXA2Q9Y261 457 aaPredicted RBP13.67□□□□□ -0.22
RHBDD3-207ENST00000496342 CCL24O00175 119 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 SAA1P0DJI8 122 aaPredicted RBP13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 ZNF182P17025 639 aaPredicted RBP13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 HLA-DMAP28067 261 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 MYCNOSP40205 109 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 LGALS7P47929 136 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 KPRPQ5T749 579 aaPredicted RBP13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 OVCH2Q7RTZ1 564 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 GPX8Q8TED1 209 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 MS4A10Q96PG2 267 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 DCUN1D5Q9BTE7 237 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 FXYD6Q9H0Q3 95 aa13.66□□□□□ -0.22
RHBDD3-207ENST00000496342 CNIH1O95406 144 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 NAT1P18440 290 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 RAB9AP51151 201 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 TNXAQ16473 311 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 VMA21Q3ZAQ7 101 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 ACTBL2Q562R1 376 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 C10orf55Q5SWW7 151 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 ASPHD1Q5U4P2 390 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 FOXB2Q5VYV0 432 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 MZT2AQ6P582 158 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 TMEM65Q6PI78 240 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 ZNF818PQ6ZRF7 136 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 LYSMD2Q8IV50 215 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 OR5H2Q8NGV7 314 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 C4orf3Q8WVX3 66 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 CMTM3Q96MX0 182 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 ZNF2Q9BSG1 426 aaPredicted RBP13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 EXTL2Q9UBQ6 330 aa13.65□□□□□ -0.22
RHBDD3-207ENST00000496342 SMIM31A0A1B0GVY4 71 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms