RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 RUNX1Q01196 453 aa13.28□□□□□ -0.28
COMMD3-214ENST00000496071 KIAA0141Q14154 515 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-214ENST00000496071 FXYD3Q14802 87 aa13.28□□□□□ -0.28
COMMD3-214ENST00000496071 DEFB136Q30KP8 78 aa13.28□□□□□ -0.28
COMMD3-214ENST00000496071 ACTBL2Q562R1 376 aa13.28□□□□□ -0.28
COMMD3-214ENST00000496071 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-214ENST00000496071 ARPC1AQ92747 370 aa13.28□□□□□ -0.28
COMMD3-214ENST00000496071 SLC25A46Q96AG3 418 aa13.28□□□□□ -0.28
COMMD3-214ENST00000496071 AURKAIP1Q9NWT8 199 aaPredicted RBP13.28□□□□□ -0.28
COMMD3-214ENST00000496071 RBMX2Q9Y388 322 aaKnown RBP13.28□□□□□ -0.28
COMMD3-214ENST00000496071 PRELID3BQ9Y3B1 194 aa13.28□□□□□ -0.28
COMMD3-214ENST00000496071 A3GALT2U3KPV4 340 aa13.28□□□□□ -0.28
COMMD3-214ENST00000496071 LINC00473A8K010 186 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 I3L521 148 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 TUSC2O75896 110 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 CNIH1O95406 144 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 CRYGBP07316 175 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 RAB25P57735 213 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 VMA21Q3ZAQ7 101 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 DMRTA1Q5VZB9 504 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 GVQW1Q8N7I0 195 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 SAMD12Q8N8I0 201 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 TEX45Q8NA69 505 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 LFNGQ8NES3 379 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 OR11H1Q8NG94 326 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 OR13F1Q8NGS4 319 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 MRAPQ8TCY5 172 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 TMEM68Q96MH6 324 aa13.27□□□□□ -0.29
COMMD3-214ENST00000496071 FAM103A1Q9BTL3 118 aaKnown RBP13.27□□□□□ -0.29
COMMD3-214ENST00000496071 SOX15O60248 233 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 CRYZL1O95825 349 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 EGFEM1PQ0D2K5 195 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 FHL3Q13643 280 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 KCTD9Q7L273 389 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 OR1N2Q8NGR9 330 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 CMTM3Q96MX0 182 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 HSD17B10Q99714 261 aaKnown RBP13.26□□□□□ -0.29
COMMD3-214ENST00000496071 SLA2Q9H6Q3 261 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 GNB4Q9HAV0 340 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 TPSG1Q9NRR2 321 aa13.26□□□□□ -0.29
COMMD3-214ENST00000496071 MRPS7Q9Y2R9 242 aaKnown RBP13.26□□□□□ -0.29
COMMD3-214ENST00000496071 IGKV1D-13A0A0B4J2D9 117 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 SRRM4A7MD48 611 aaKnown RBP13.25□□□□□ -0.29
COMMD3-214ENST00000496071 ARPC1BO15143 372 aaKnown RBP13.25□□□□□ -0.29
COMMD3-214ENST00000496071 OR8U8P0C7N1 319 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 IGKV1-13P0DP09 117 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 UBE2KP61086 200 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 VBP1P61758 197 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 ZNF616Q08AN1 781 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 MSMO1Q15800 293 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 TMEM69Q5SWH9 247 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 OVCH2Q7RTZ1 564 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 OR5AP2Q8NGF4 316 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 GRPEL2Q8TAA5 225 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 ACOT12Q8WYK0 555 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 DCUN1D5Q9BTE7 237 aa13.25□□□□□ -0.29
COMMD3-214ENST00000496071 H3BUA1 57 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 CREBL2O60519 120 aaPredicted RBP13.24□□□□□ -0.29
COMMD3-214ENST00000496071 FCGR3BO75015 233 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 IGLV2-14P01704 120 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 FCGR2CP31995 323 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 NCS1P62166 190 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 GNB1P62873 340 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 C9orf66Q5T8R8 295 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 ZNF66Q6ZN08 573 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 ZBTB34Q8NCN2 500 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 IFT46Q9NQC8 304 aa13.24□□□□□ -0.29
COMMD3-214ENST00000496071 SMIM31A0A1B0GVY4 71 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 PPYP01298 95 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 PTHLHP12272 177 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 HOXD3P31249 432 aaPredicted RBP13.23□□□□□ -0.29
COMMD3-214ENST00000496071 TAS2R20P59543 309 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 PJVKQ0ZLH3 352 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 CDK10Q15131 360 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 MFSD4AQ8N468 514 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 GIMAP1Q8WWP7 306 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 OR5B12Q96R08 314 aa13.23□□□□□ -0.29
COMMD3-214ENST00000496071 APOA1P02647 267 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 TRGV3P03979 118 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 LGALS1P09382 135 aaKnown RBP13.22□□□□□ -0.29
COMMD3-214ENST00000496071 SMIM18P0DKX4 95 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 AADACP22760 399 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 PRSS3P35030 304 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 RORCP51449 518 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 TPPP2P59282 170 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 KRTAP10-11P60412 298 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 RPL30P62888 115 aaKnown RBP13.22□□□□□ -0.29
COMMD3-214ENST00000496071 SSBP2P81877 361 aaPredicted RBP13.22□□□□□ -0.29
COMMD3-214ENST00000496071 EIF4EBP1Q13541 118 aaPredicted RBP13.22□□□□□ -0.29
COMMD3-214ENST00000496071 PRSS8Q16651 343 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 POC5Q8NA72 575 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 OR4S2Q8NH73 311 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 CASTOR1Q8WTX7 329 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 SECTM1Q8WVN6 248 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 TCTEX1D2Q8WW35 142 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 SNAPC3Q92966 411 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 MS4A10Q96PG2 267 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 ZNF355PQ9NSJ1 428 aa13.22□□□□□ -0.29
COMMD3-214ENST00000496071 COMMD3Q9UBI1 195 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms