RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SHOXO15266 292 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 CNIH1O95406 144 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 HLA-DQB1P01920 261 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 GNG2P59768 71 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 TIMM50Q3ZCQ8 353 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 ZNF429Q86V71 674 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 ZNF645Q8N7E2 425 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 TEX45Q8NA69 505 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 OSR1Q8TAX0 266 aaPredicted RBP18.76■□□□□ 0.59
HLA-C-209ENST00000495835 C5orf30Q96GV9 206 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 RHOVQ96L33 236 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 OR5B12Q96R08 314 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 B9D2Q9BPU9 175 aa18.76■□□□□ 0.59
HLA-C-209ENST00000495835 DNAH9Q9NYC9 4486 aa18.75■□□□□ 0.59
HLA-C-209ENST00000495835 TMEM235A6NFC5 223 aa18.75■□□□□ 0.59
HLA-C-209ENST00000495835 ANXA10Q9UJ72 324 aa18.75■□□□□ 0.59
HLA-C-209ENST00000495835 LOC100506127A0A0U1RQW1 187 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 OVOL1O14753 267 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 HSPB1P04792 205 aaKnown RBP18.74■□□□□ 0.59
HLA-C-209ENST00000495835 UBE2KP61086 200 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 MXD1Q05195 221 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 NEDD8Q15843 81 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 VMA21Q3ZAQ7 101 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 CROCCP3Q8IVE0 287 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 NUDCD2Q8WVJ2 157 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 DCUN1D4Q92564 292 aa18.74■□□□□ 0.59
HLA-C-209ENST00000495835 A0A0G2JLM5 398 aa18.73■□□□□ 0.59
HLA-C-209ENST00000495835 LINC00473A8K010 186 aa18.73■□□□□ 0.59
HLA-C-209ENST00000495835 TPPP2P59282 170 aa18.73■□□□□ 0.59
HLA-C-209ENST00000495835 SSBP2P81877 361 aaPredicted RBP18.73■□□□□ 0.59
HLA-C-209ENST00000495835 POC5Q8NA72 575 aa18.73■□□□□ 0.59
HLA-C-209ENST00000495835 GRPEL2Q8TAA5 225 aa18.73■□□□□ 0.59
HLA-C-209ENST00000495835 PRELID3BQ9Y3B1 194 aa18.73■□□□□ 0.59
HLA-C-209ENST00000495835 SRRM4A7MD48 611 aaKnown RBP18.72■□□□□ 0.59
HLA-C-209ENST00000495835 SSX5O60225 188 aa18.72■□□□□ 0.59
HLA-C-209ENST00000495835 CLEC2LP0C7M8 214 aa18.72■□□□□ 0.59
HLA-C-209ENST00000495835 CD69Q07108 199 aa18.72■□□□□ 0.59
HLA-C-209ENST00000495835 IDNKQ5T6J7 187 aa18.72■□□□□ 0.59
HLA-C-209ENST00000495835 MS4A10Q96PG2 267 aa18.72■□□□□ 0.59
HLA-C-209ENST00000495835 RNF167Q9H6Y7 350 aa18.72■□□□□ 0.59
HLA-C-209ENST00000495835 DIABLOQ9NR28 239 aa18.72■□□□□ 0.59
HLA-C-209ENST00000495835 SPATA2Q9UM82 520 aa18.72■□□□□ 0.59
HLA-C-209ENST00000495835 LSM4Q9Y4Z0 139 aaKnown RBP18.72■□□□□ 0.59
HLA-C-209ENST00000495835 CREBL2O60519 120 aaPredicted RBP18.71■□□□□ 0.59
HLA-C-209ENST00000495835 TRGV3P03979 118 aa18.71■□□□□ 0.59
HLA-C-209ENST00000495835 ECI1P42126 302 aa18.71■□□□□ 0.59
HLA-C-209ENST00000495835 PJVKQ0ZLH3 352 aa18.71■□□□□ 0.59
HLA-C-209ENST00000495835 OVCH2Q7RTZ1 564 aa18.71■□□□□ 0.59
HLA-C-209ENST00000495835 CASTOR1Q8WTX7 329 aa18.71■□□□□ 0.59
HLA-C-209ENST00000495835 DLX4Q92988 240 aaPredicted RBP18.71■□□□□ 0.59
HLA-C-209ENST00000495835 SLC25A38Q96DW6 304 aa18.71■□□□□ 0.59
HLA-C-209ENST00000495835 ALX4Q9H161 411 aaPredicted RBP18.71■□□□□ 0.59
HLA-C-209ENST00000495835 VCX3AQ9NNX9 186 aa18.71■□□□□ 0.59
HLA-C-209ENST00000495835 ZNF256Q9Y2P7 627 aaPredicted RBP18.71■□□□□ 0.59
HLA-C-209ENST00000495835 MRPS7Q9Y2R9 242 aaKnown RBP18.71■□□□□ 0.59
HLA-C-209ENST00000495835 IGHV4OR15-8A0A075B7B6 117 aa18.7■□□□□ 0.58
HLA-C-209ENST00000495835 A0A087WW49 117 aa18.7■□□□□ 0.58
HLA-C-209ENST00000495835 TUSC2O75896 110 aa18.7■□□□□ 0.58
HLA-C-209ENST00000495835 CRYZL1O95825 349 aa18.7■□□□□ 0.58
HLA-C-209ENST00000495835 NFYAP23511 347 aaPredicted RBP18.7■□□□□ 0.58
HLA-C-209ENST00000495835 VAX1Q5SQQ9 334 aa18.7■□□□□ 0.58
HLA-C-209ENST00000495835 OR5H6Q8NGV6 325 aa18.7■□□□□ 0.58
HLA-C-209ENST00000495835 HSD17B10Q99714 261 aaKnown RBP18.7■□□□□ 0.58
HLA-C-209ENST00000495835 RBMX2Q9Y388 322 aaKnown RBP18.7■□□□□ 0.58
HLA-C-209ENST00000495835 TRAV18A0A075B6X5 111 aa18.69■□□□□ 0.58
HLA-C-209ENST00000495835 A0A087WXM4 84 aa18.69■□□□□ 0.58
HLA-C-209ENST00000495835 AADACP22760 399 aa18.69■□□□□ 0.58
HLA-C-209ENST00000495835 MSMO1Q15800 293 aa18.69■□□□□ 0.58
HLA-C-209ENST00000495835 PRSS8Q16651 343 aa18.69■□□□□ 0.58
HLA-C-209ENST00000495835 MRGPRG-AS1Q2M3A8 158 aa18.69■□□□□ 0.58
HLA-C-209ENST00000495835 KCTD9Q7L273 389 aa18.69■□□□□ 0.58
HLA-C-209ENST00000495835 RANGRFQ9HD47 186 aaPredicted RBP18.69■□□□□ 0.58
HLA-C-209ENST00000495835 ZNF355PQ9NSJ1 428 aa18.69■□□□□ 0.58
HLA-C-209ENST00000495835 SORL1Q92673 2214 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 C13orf42A0A1B0GVH6 325 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 TNFAIP8O95379 198 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 NHLRC4P0CG21 123 aaPredicted RBP18.68■□□□□ 0.58
HLA-C-209ENST00000495835 CBX5P45973 191 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 SLURP1P55000 103 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 ACSM6Q6P461 480 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 HOGA1Q86XE5 327 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 BEST4Q8NFU0 473 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 OR5T1Q8NG75 326 aa18.68■□□□□ 0.58
HLA-C-209ENST00000495835 TINAGL1Q9GZM7 467 aaPredicted RBP18.68■□□□□ 0.58
HLA-C-209ENST00000495835 IGLV2-14P01704 120 aa18.67■□□□□ 0.58
HLA-C-209ENST00000495835 IGHV3-11P01762 117 aa18.67■□□□□ 0.58
HLA-C-209ENST00000495835 ARPC4P59998 168 aa18.67■□□□□ 0.58
HLA-C-209ENST00000495835 CDK10Q15131 360 aa18.67■□□□□ 0.58
HLA-C-209ENST00000495835 ZNF66Q6ZN08 573 aa18.67■□□□□ 0.58
HLA-C-209ENST00000495835 USMG5Q96IX5 58 aa18.67■□□□□ 0.58
HLA-C-209ENST00000495835 AUNIPQ9H7T9 357 aa18.67■□□□□ 0.58
HLA-C-209ENST00000495835 TNCP24821 2201 aa18.67■□□□□ 0.58
HLA-C-209ENST00000495835 IGKV1D-13A0A0B4J2D9 117 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 AIREO43918 545 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 FCGR3BO75015 233 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 SAP30O75446 220 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 IGKV1-13P0DP09 117 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 ZP3P21754 424 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 MMD2Q8IY49 270 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 TSPAN14Q8NG11 270 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms