RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 OR10G4Q8NGN3 311 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 OR10G9Q8NGN4 311 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 OR10G7Q8NGN6 311 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 CIB3Q96Q77 187 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-209ENST00000494623 SLC25A22Q9H936 323 aa9.31□□□□□ -0.92
CHMP3-209ENST00000494623 MGAQ8IWI9 3026 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 UBE2CO00762 179 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 SELLP14151 372 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 GLRXP35754 106 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 ERVFRD-1P60508 538 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 FFAR4Q5NUL3 377 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 UTF1Q5T230 341 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 IGF2-ASQ6U949 168 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 DEFB108BQ8NET1 73 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 TIMM9Q9Y5J7 89 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 IFNA1P01562 189 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 FAM27E3Q08E93 113 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 ZNF674Q2M3X9 581 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 C1orf185Q5T7R7 199 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 IGFL3Q6UXB1 125 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 CENPVQ7Z7K6 275 aaPredicted RBP9.3□□□□□ -0.92
CHMP3-209ENST00000494623 ZNF709Q8N972 641 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 JPT1Q9UK76 154 aa9.3□□□□□ -0.92
CHMP3-209ENST00000494623 YPEL1O60688 119 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 PRAMEF5Q5TYX0 476 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 Q6ZS92 163 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 C22orf34Q6ZV56 151 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 OR4A16Q8NH70 328 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 GATAD1Q8WUU5 269 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 YPEL2Q96QA6 119 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 MRPL37Q9BZE1 423 aaKnown RBP9.29□□□□□ -0.92
CHMP3-209ENST00000494623 TM4SF5O14894 197 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 SLC31A2O15432 143 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 KLK10O43240 276 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 HPRT1P00492 218 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 DEFA4P12838 97 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 LOXL3P58215 753 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 PAX5Q02548 391 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 SLC16A13Q7RTY0 426 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 FAM90A1Q86YD7 464 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 RBM14Q96PK6 669 aaKnown RBP9.29□□□□□ -0.92
CHMP3-209ENST00000494623 P2RX4Q99571 388 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 SIRT7Q9NRC8 400 aa9.29□□□□□ -0.92
CHMP3-209ENST00000494623 MAP1BP46821 2468 aaKnown RBP9.29□□□□□ -0.92
CHMP3-209ENST00000494623 RIF1Q5UIP0 2472 aaKnown RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 AP4M1O00189 453 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 CYB5BO43169 146 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 LHBP01229 141 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 IGHV2-5P01817 119 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 BMP5P22003 454 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 CFHR2P36980 270 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 EIF2S3P41091 472 aaKnown RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 GNB2P62879 340 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 NKX6-1P78426 367 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 NCMAPQ5T1S8 102 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 DUX4L9Q6RFH8 374 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 RBMXL3Q8N7X1 1067 aaKnown RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 NANPQ8TBE9 248 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 S1PR3Q99500 378 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 SDF2L1Q9HCN8 221 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 CALYQ9NYX4 217 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 OR6C3Q9NZP0 311 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 METTL1Q9UBP6 276 aaKnown RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 PTPRBP23467 1997 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 ZFHX2Q9C0A1 2572 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 TRAV3A0A0B4J244 114 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 CXorf65A6NEN9 183 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 C15orf62A8K5M9 175 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 B4DEV8 164 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 IFNA10P01566 189 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 MBP02144 154 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 S100A9P06702 114 aaKnown RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 CD81P60033 236 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 C1orf229Q6ZS94 237 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 C1QL4Q86Z23 238 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 Q8TCH9 128 aa9.28□□□□□ -0.92
CHMP3-209ENST00000494623 ACTR3CQ9C0K3 210 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-209ENST00000494623 CTXND1A0A1B0GTU2 59 aa9.27□□□□□ -0.92
CHMP3-209ENST00000494623 SMCO3A2RU48 225 aa9.27□□□□□ -0.92
CHMP3-209ENST00000494623 CYB5R3P00387 301 aaPredicted RBP9.27□□□□□ -0.92
CHMP3-209ENST00000494623 PSMB3P49720 205 aa9.27□□□□□ -0.92
CHMP3-209ENST00000494623 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.92
CHMP3-209ENST00000494623 CR1LQ2VPA4 569 aa9.27□□□□□ -0.92
CHMP3-209ENST00000494623 FAM209BQ5JX69 171 aa9.27□□□□□ -0.92
CHMP3-209ENST00000494623 RAB24Q969Q5 203 aa9.27□□□□□ -0.92
CHMP3-209ENST00000494623 IFI27L2Q9H2X8 130 aa9.27□□□□□ -0.92
CHMP3-209ENST00000494623 HEYLQ9NQ87 328 aaPredicted RBP9.27□□□□□ -0.92
CHMP3-209ENST00000494623 CEP250Q9BV73 2442 aa9.27□□□□□ -0.93
CHMP3-209ENST00000494623 F2RL2O00254 374 aa9.27□□□□□ -0.93
CHMP3-209ENST00000494623 TIMP3P35625 211 aa9.27□□□□□ -0.93
CHMP3-209ENST00000494623 NDUFA6P56556 154 aa9.27□□□□□ -0.93
CHMP3-209ENST00000494623 SELENOVP59797 346 aa9.27□□□□□ -0.93
CHMP3-209ENST00000494623 ERVK-16P61578 105 aa9.27□□□□□ -0.93
CHMP3-209ENST00000494623 TNFAIP6P98066 277 aaPredicted RBP9.27□□□□□ -0.93
CHMP3-209ENST00000494623 PNRC1Q12796 327 aaPredicted RBP9.27□□□□□ -0.93
CHMP3-209ENST00000494623 RPUSD4Q96CM3 377 aaKnown RBP9.27□□□□□ -0.93
CHMP3-209ENST00000494623 ZNF318Q5VUA4 2279 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 C17orf112F2Z3M2 114 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms