RNA–Protein interactions for RNA: ENST00000494538.6

CBWD6-208, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-208ENST00000494538 C12orf45Q8N5I9 185 aaPredicted RBP10.44□□□□□ -0.74
CBWD6-208ENST00000494538 OR4S2Q8NH73 311 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 CD300LFQ8TDQ1 290 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 MITD1Q8WV92 249 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 WASHC3Q9Y3C0 194 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 CSPG4Q6UVK1 2322 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 ACANP16112 2415 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 C7orf66A4D0T2 115 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 VGLL3A8MV65 326 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 FSHBP01225 129 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 IGKV1-16P04430 117 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 FBP1P09467 338 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 FOSL1P15407 271 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 HNF1AP20823 631 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 SRPXP78539 464 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 TAGLNQ01995 201 aaKnown RBP10.44□□□□□ -0.74
CBWD6-208ENST00000494538 ZNF585BQ52M93 769 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 LGI3Q8N145 548 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 TCTEX1D1Q8N7M0 179 aa10.44□□□□□ -0.74
CBWD6-208ENST00000494538 S1PR2O95136 353 aa10.43□□□□□ -0.74
CBWD6-208ENST00000494538 RRASP10301 218 aa10.43□□□□□ -0.74
CBWD6-208ENST00000494538 RPA2P15927 270 aa10.43□□□□□ -0.74
CBWD6-208ENST00000494538 RAB13P51153 203 aa10.43□□□□□ -0.74
CBWD6-208ENST00000494538 HES1Q14469 280 aa10.43□□□□□ -0.74
CBWD6-208ENST00000494538 PDPNQ86YL7 162 aa10.43□□□□□ -0.74
CBWD6-208ENST00000494538 BCL6BQ8N143 479 aaPredicted RBP10.43□□□□□ -0.74
CBWD6-208ENST00000494538 RNASE11Q8TAA1 199 aaKnown RBP10.43□□□□□ -0.74
CBWD6-208ENST00000494538 LHFPL5Q8TAF8 219 aa10.43□□□□□ -0.74
CBWD6-208ENST00000494538 FLYWCH2Q96CP2 140 aaKnown RBP10.43□□□□□ -0.74
CBWD6-208ENST00000494538 CDS2O95674 445 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 HPRT1P00492 218 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 HOXB5P09067 269 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 BRS3P32247 399 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 RPS16P62249 146 aaKnown RBP10.42□□□□□ -0.74
CBWD6-208ENST00000494538 HNF4GQ14541 408 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 DHRS7BQ6IAN0 325 aaPredicted RBP10.42□□□□□ -0.74
CBWD6-208ENST00000494538 Q71RC1 249 aaPredicted RBP10.42□□□□□ -0.74
CBWD6-208ENST00000494538 CFHR4Q92496 578 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 RBPMSQ93062 196 aaKnown RBP10.42□□□□□ -0.74
CBWD6-208ENST00000494538 MED28Q9H204 178 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 MDFIC2A0A1B0GVS7 189 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 SHOXO15266 292 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.74
CBWD6-208ENST00000494538 KRASP01116 189 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 IGKV1D-33P01593 117 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 IGKV1-33P01594 117 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 SNRNP70P08621 437 aaKnown RBP10.42□□□□□ -0.74
CBWD6-208ENST00000494538 CD1BP29016 333 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 G6PCP35575 357 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 AKR1C2P52895 323 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 DEFB112Q30KQ8 113 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 SSX9Q7RTT3 188 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 SELENOHQ8IZQ5 122 aaKnown RBP10.42□□□□□ -0.74
CBWD6-208ENST00000494538 SLC35G3Q8N808 338 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 OR4C13Q8NGP0 309 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 HARBI1Q96MB7 349 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 TMEM56Q96MV1 263 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 PLEKHA2Q9HB19 425 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 FAM212BQ9NTI7 297 aaPredicted RBP10.42□□□□□ -0.74
CBWD6-208ENST00000494538 TMEM56-RWDD3S4R434 201 aa10.42□□□□□ -0.74
CBWD6-208ENST00000494538 FAM25EA8MYX2 175 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 GOSR2O14653 212 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 ADAP1O75689 374 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 VENTXO95231 258 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 IGKV1-39P01597 117 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 IGKV1D-39P04432 117 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 LYZL2Q7Z4W2 148 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 VKORC1L1Q8N0U8 176 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 DMBX1Q8NFW5 382 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 SSX3Q99909 188 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 MEGF9Q9H1U4 602 aa10.41□□□□□ -0.74
CBWD6-208ENST00000494538 GSX1Q9H4S2 264 aaPredicted RBP10.41□□□□□ -0.74
CBWD6-208ENST00000494538 TLN2Q9Y4G6 2542 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 A0A0B4J2A0 478 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 MARCH11A6NNE9 402 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 CCSO14618 274 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 ATG12O94817 140 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 MOSP00540 346 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 HRASP01112 189 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 FAM106CPP0CH98 169 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 NQO2P16083 231 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 ERVK-16P61578 105 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 HABP2Q14520 560 aaPredicted RBP10.4□□□□□ -0.74
CBWD6-208ENST00000494538 TMEM177Q53S58 311 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 C9orf139Q6ZV77 190 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 CADM3Q8N126 398 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 LRTM2Q8N967 370 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 OSR1Q8TAX0 266 aaPredicted RBP10.4□□□□□ -0.74
CBWD6-208ENST00000494538 IL22RA2Q969J5 263 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 RRNAD1Q96FB5 475 aaKnown RBP10.4□□□□□ -0.74
CBWD6-208ENST00000494538 COMMD9Q9P000 198 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 SHPKQ9UHJ6 478 aa10.4□□□□□ -0.74
CBWD6-208ENST00000494538 C13orf42A0A1B0GVH6 325 aa10.4□□□□□ -0.75
CBWD6-208ENST00000494538 IFNA21P01568 189 aa10.4□□□□□ -0.75
CBWD6-208ENST00000494538 TMEM11P17152 192 aa10.4□□□□□ -0.75
CBWD6-208ENST00000494538 RRAS2P62070 204 aaPredicted RBP10.4□□□□□ -0.75
CBWD6-208ENST00000494538 C2orf68Q2NKX9 166 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms