RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 CDX1P47902 265 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-224ENST00000494132 TAS2R20P59543 309 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 RPL30P62888 115 aaKnown RBP11.45□□□□□ -0.58
ATG4B-224ENST00000494132 SSBP2P81877 361 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-224ENST00000494132 FXYD3Q14802 87 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 TMEM177Q53S58 311 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 C19orf54Q5BKX5 351 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 GPR107Q5VW38 600 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 IDO2Q6ZQW0 420 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 KCTD9Q7L273 389 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 MINDY2Q8NBR6 621 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 ARPC1AQ92747 370 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 RCC1LQ96I51 464 aaKnown RBP11.45□□□□□ -0.58
ATG4B-224ENST00000494132 ALX4Q9H161 411 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-224ENST00000494132 RBMX2Q9Y388 322 aaKnown RBP11.45□□□□□ -0.58
ATG4B-224ENST00000494132 NUBP2Q9Y5Y2 271 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 TNFSF12O43508 249 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 FCGR3BO75015 233 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 CNIH1O95406 144 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 CRYGBP07316 175 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 APELAP0DMC3 54 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 FCGR2CP31995 323 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 RAB9AP51151 201 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 FXYD4P59646 89 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 TAGLNQ01995 201 aaKnown RBP11.44□□□□□ -0.58
ATG4B-224ENST00000494132 CBX3Q13185 183 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 KIAA0141Q14154 515 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-224ENST00000494132 ACTBL2Q562R1 376 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 ZNF491Q8N8L2 437 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 MYOZ3Q8TDC0 251 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 SECTM1Q8WVN6 248 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 C4orf3Q8WVX3 66 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 MS4A10Q96PG2 267 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 IFT46Q9NQC8 304 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 CCL28Q9NRJ3 127 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 AURKAIP1Q9NWT8 199 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-224ENST00000494132 TAS2R8Q9NYW2 309 aa11.44□□□□□ -0.58
ATG4B-224ENST00000494132 FOXA2Q9Y261 457 aaPredicted RBP11.44□□□□□ -0.58
ATG4B-224ENST00000494132 HPGDSO60760 199 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 TMEM127O75204 238 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 SLC6A1P30531 599 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 LGALS7P47929 136 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 CRIP2P52943 208 aaPredicted RBP11.43□□□□□ -0.58
ATG4B-224ENST00000494132 DEFA5Q01523 94 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 CTF1Q16619 201 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 ANKRD13BQ86YJ7 626 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 OR11H1Q8NG94 326 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 ADTRPQ96IZ2 230 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 DCUN1D5Q9BTE7 237 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 MRPS26Q9BYN8 205 aaKnown RBP11.43□□□□□ -0.58
ATG4B-224ENST00000494132 NECAP2Q9NVZ3 263 aa11.43□□□□□ -0.58
ATG4B-224ENST00000494132 MRPS7Q9Y2R9 242 aaKnown RBP11.43□□□□□ -0.58
ATG4B-224ENST00000494132 GABARAPO95166 117 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 PPYP01298 95 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 IGHV3-11P01762 117 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 RRASP10301 218 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 KRTAP10-11P60412 298 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 TMEM267Q0VDI3 215 aaPredicted RBP11.42□□□□□ -0.58
ATG4B-224ENST00000494132 MRGPRG-AS1Q2M3A8 158 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 VKORC1L1Q8N0U8 176 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 OR5T1Q8NG75 326 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 TCTEX1D2Q8WW35 142 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
ATG4B-224ENST00000494132 UBE2E2Q96LR5 201 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 ZNF355PQ9NSJ1 428 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 VSIG4Q9Y279 399 aa11.42□□□□□ -0.58
ATG4B-224ENST00000494132 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 I3L521 148 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 PMP2P02689 132 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
ATG4B-224ENST00000494132 ELK1P19419 428 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 CBX5P45973 191 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 RFX2P48378 723 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 TPPP2P59282 170 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 EIF4EBP1Q13541 118 aaPredicted RBP11.41□□□□□ -0.58
ATG4B-224ENST00000494132 CDK10Q15131 360 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 TNXAQ16473 311 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 VMA21Q3ZAQ7 101 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 RNASE12Q5GAN4 147 aaKnown RBP11.41□□□□□ -0.58
ATG4B-224ENST00000494132 ASPHD1Q5U4P2 390 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 GPR141Q7Z602 305 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 TMEM17Q86X19 198 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 SNX29P2Q8IUI4 249 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 OR5AP2Q8NGF4 316 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 MRAPQ8TCY5 172 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 ACOT12Q8WYK0 555 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 SLC5A7Q9GZV3 580 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 EHFQ9NZC4 300 aa11.41□□□□□ -0.58
ATG4B-224ENST00000494132 PRSS3P35030 304 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 ALDH3B2P48448 385 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 RORCP51449 518 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 BRWD1-AS2P59051 145 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 UBE2KP61086 200 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 FHL3Q13643 280 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 AKIRIN2Q53H80 203 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 C10orf55Q5SWW7 151 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 MFSD4AQ8N468 514 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 TCTEX1D1Q8N7M0 179 aa11.4□□□□□ -0.58
ATG4B-224ENST00000494132 OR5M8Q8NGP6 311 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms