RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 SSX2Q16385 188 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 TMEM268Q5VZI3 342 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 DHRS7BQ6IAN0 325 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-231ENST00000494043 BRD3OSQ6XYD6 125 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 MOB3BQ86TA1 216 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 PDPNQ86YL7 162 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 ZNF695Q8IW36 515 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 SELENOHQ8IZQ5 122 aaKnown RBP9.2□□□□□ -0.94
MCF2L-231ENST00000494043 DYNAPQ8N1N2 210 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 RBPMSQ93062 196 aaKnown RBP9.2□□□□□ -0.94
MCF2L-231ENST00000494043 WASHC3Q9Y3C0 194 aa9.2□□□□□ -0.94
MCF2L-231ENST00000494043 IGHV3-72A0A0B4J1Y9 119 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 PIGBOS1A0A0B4J2F0 54 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 DUXBA0A1W2PPF3 345 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 HMX3A6NHT5 357 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 H7C2Y5 167 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 GOSR2O14653 212 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 TIMM23O14925 209 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 CRYZL1O95825 349 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 HPRT1P00492 218 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 TRAPPC2P0DI81 140 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 TRAPPC2BP0DI82 140 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 SULT1A3P0DMM9 295 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 SULT1A4P0DMN0 295 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 PAX6P26367 422 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 MC5RP33032 325 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 BPIFB3P59826 476 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 HABP2Q14520 560 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-231ENST00000494043 C2orf68Q2NKX9 166 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 TEX29Q8N6K0 151 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 SLC35G3Q8N808 338 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 OR11H7Q8NGC8 314 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 NANPQ8TBE9 248 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 CHAC2Q8WUX2 184 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 CFHR4Q92496 578 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 PLEKHA2Q9HB19 425 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 RAB18Q9NP72 206 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 COMMD9Q9P000 198 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 MGAT4CQ9UBM8 478 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 NUP50Q9UKX7 468 aa9.19□□□□□ -0.94
MCF2L-231ENST00000494043 ZNF469Q96JG9 3925 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-231ENST00000494043 A0A0U1RQK1 487 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 CCSO14618 274 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 ADAP1O75689 374 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 ATG12O94817 140 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 IGKV1-16P04430 117 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 HOXB5P09067 269 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 HLA-GP17693 338 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 CD1BP29016 333 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 ARHGDIBP52566 201 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 TMEM177Q53S58 311 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 GGNBP1Q5YKI7 109 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 CSPG4Q6UVK1 2322 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 LYZL2Q7Z4W2 148 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 OR5M8Q8NGP6 311 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 R3HDM4Q96D70 268 aa9.18□□□□□ -0.94
MCF2L-231ENST00000494043 ACANP16112 2415 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 MARCH11A6NNE9 402 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 VENTXO95231 258 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 IFNA21P01568 189 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 IGKV1-5P01602 117 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 NQO2P16083 231 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 CXCL3P19876 107 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 VDAC1P21796 283 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 G6PCP35575 357 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 AKR1C2P52895 323 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 ERVK-16P61578 105 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 NMSQ5H8A3 153 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 C9orf139Q6ZV77 190 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 OR4C13Q8NGP0 309 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 RNASE11Q8TAA1 199 aaKnown RBP9.17□□□□□ -0.94
MCF2L-231ENST00000494043 OSR1Q8TAX0 266 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-231ENST00000494043 LSM10Q969L4 123 aaKnown RBP9.17□□□□□ -0.94
MCF2L-231ENST00000494043 FLYWCH2Q96CP2 140 aaKnown RBP9.17□□□□□ -0.94
MCF2L-231ENST00000494043 RBMXL1Q96E39 390 aaKnown RBP9.17□□□□□ -0.94
MCF2L-231ENST00000494043 SEC22AQ96IW7 307 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 HARBI1Q96MB7 349 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 TMUB1Q9BVT8 246 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 YAE1D1Q9NRH1 226 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 FAM96BQ9Y3D0 163 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 TMED3Q9Y3Q3 217 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 SOX21Q9Y651 276 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-231ENST00000494043 TLN2Q9Y4G6 2542 aa9.17□□□□□ -0.94
MCF2L-231ENST00000494043 A0A0G2JRQ6 117 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 FAM90A9PA6NNJ1 464 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 FAM25EA8MYX2 175 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 SHOXO15266 292 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 SIX6O95475 246 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 HRASP01112 189 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 KRASP01116 189 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 FBP1P09467 338 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 P0C879 139 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 FOSL1P15407 271 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 BRS3P32247 399 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 H2BFSP57053 126 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 POU2AF1Q16633 256 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 FAM120AOSQ5T036 256 aa9.16□□□□□ -0.94
MCF2L-231ENST00000494043 FAM219AQ8IW50 185 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms