RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 MBNL2Q5VZF2 373 aaKnown RBP6.81□□□□□ -1.32
HDAC6-234ENST00000493923 SGPP2Q8IWX5 399 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 RFLNBQ8N5W9 214 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 AQP3Q92482 292 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 ZMYND19Q96E35 227 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-234ENST00000493923 TSSK2Q96PF2 358 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 OR5B12Q96R08 314 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 TP53RKQ96S44 253 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 PYGO2Q9BRQ0 406 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 CABLES2Q9BTV7 478 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 SAP30LQ9HAJ7 183 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 ESM1Q9NQ30 184 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 SOX21Q9Y651 276 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-234ENST00000493923 IGHV3-64DA0A0J9YX35 117 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 PRSS37A4D1T9 235 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 K7N7A8 449 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 ARPC3O15145 178 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 LDLRAD4O15165 306 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 HPRT1P00492 218 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 FSHBP01225 129 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 MBPP02686 304 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 LCATP04180 440 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 MAS1P04201 325 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 PGA5P0DJD9 388 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 PSMB10P40306 273 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 PAFAH1B2P68402 229 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 LCN2P80188 198 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 MFGE8Q08431 387 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 IL13RA2Q14627 380 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 RSPO1Q2MKA7 263 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 DPY19L2P2Q6ZN68 376 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 TRAPPC6BQ86SZ2 158 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF738Q8NE65 137 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 OR52E2Q8NGJ4 325 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 OR4X1Q8NH49 305 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 TSEN15Q8WW01 171 aaKnown RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 ITLN1Q8WWA0 313 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 CCL17Q92583 94 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 EMG1Q92979 244 aaKnown RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 FGGYQ96C11 551 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 C4orf45Q96LM5 186 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 DIRC2Q96SL1 478 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 P2RX4Q99571 388 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 ALKBH7Q9BT30 221 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 C1QTNF5Q9BXJ0 243 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 RBKSQ9H477 322 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 CNTD2Q9H8S5 307 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 ELL3Q9HB65 397 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 Q9N2K0 584 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 DECR2Q9NUI1 292 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 AURKAIP1Q9NWT8 199 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 COA3Q9Y2R0 106 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-234ENST00000493923 IER3IP1Q9Y5U9 82 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 WSB1Q9Y6I7 421 aa6.8□□□□□ -1.32
HDAC6-234ENST00000493923 A0A1B0GU03 582 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 C5orf63A6NC05 138 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 MEIS3P1A6NDR6 274 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 OR6C6A6NF89 314 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 OR4C45A6NMZ5 311 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF705FA8MVS1 300 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 H0YL77 283 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 TRAPPC2LH3BP13 241 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 GEMIN2O14893 280 aaKnown RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 RER1O15258 196 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 SLC16A7O60669 478 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 SCAF4O95104 1147 aaKnown RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF205O95201 554 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 IFNA1P01562 189 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 CD55P08174 381 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 ADH4P08319 380 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF705DP0CH99 300 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF705BP0CI00 300 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 SELEP16581 610 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 GCH1P30793 250 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 NAA10P41227 235 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 SOX2P48431 317 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 MTCP1P56278 107 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 SELENOVP59797 346 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 PMS2P11Q13670 270 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 TEX38Q6PEX7 206 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 C1QL2Q7Z5L3 287 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 LINC01551Q86U37 167 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 H1FOOQ8IZA3 346 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 OR5AS1Q8N127 324 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 GBGT1Q8N5D6 347 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 OR4B1Q8NGF8 309 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 OR4D6Q8NGJ1 314 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 RNASE8Q8TDE3 154 aaKnown RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 TAF15Q92804 592 aaKnown RBP eCLIP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 GNPNAT1Q96EK6 184 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 HIST1H2AAQ96QV6 131 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 VPS25Q9BRG1 176 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 NMNAT2Q9BZQ4 307 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 GRHPRQ9UBQ7 328 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 FBLN5Q9UBX5 448 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 ANAPC10Q9UM13 185 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 GPR132Q9UNW8 380 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 C14orf166Q9Y224 244 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms