RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 OGFRL1Q5TC84 451 aaPredicted RBP13.18□□□□□ -0.3
COL9A1-210ENST00000493682 ADAD2Q8NCV1 583 aaKnown RBP13.18□□□□□ -0.3
COL9A1-210ENST00000493682 OR56B1Q8NGI3 324 aa13.18□□□□□ -0.3
COL9A1-210ENST00000493682 UFD1Q92890 307 aa13.18□□□□□ -0.3
COL9A1-210ENST00000493682 SNAPC3Q92966 411 aa13.18□□□□□ -0.3
COL9A1-210ENST00000493682 PHB2Q99623 299 aa13.18□□□□□ -0.3
COL9A1-210ENST00000493682 TAGLNQ01995 201 aaKnown RBP13.17□□□□□ -0.3
COL9A1-210ENST00000493682 CBX3Q13185 183 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 IRF3Q14653 427 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 RTL8BQ17RB0 113 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 C2orf76Q3KRA6 126 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 LINC00322Q6ZN03 302 aaPredicted RBP13.17□□□□□ -0.3
COL9A1-210ENST00000493682 OR10J5Q8NHC4 309 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 FAM3DQ96BQ1 224 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 CABLES2Q9BTV7 478 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 HIPK2Q9H2X6 1198 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 PLEKHA3Q9HB20 300 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 PEMTQ9UBM1 199 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 KCNK7Q9Y2U2 307 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 TNCP24821 2201 aa13.17□□□□□ -0.3
COL9A1-210ENST00000493682 TRBV6-7A0A0A0MS04 114 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 A0A0B4J203 849 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 SHISA3A0PJX4 238 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 DENRO43583 198 aaKnown RBP13.16□□□□□ -0.3
COL9A1-210ENST00000493682 FCGR3AP08637 254 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 OR9G9P0C7N8 305 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 GSTT2P0CG29 244 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 GSTT2BP0CG30 244 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 RPS25P62851 125 aaKnown RBP13.16□□□□□ -0.3
COL9A1-210ENST00000493682 PLA2G7Q13093 441 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 TPBGQ13641 420 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 PRSS8Q16651 343 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 TEX45Q8NA69 505 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 CEPT1Q9Y6K0 416 aa13.16□□□□□ -0.3
COL9A1-210ENST00000493682 BMPR1BO00238 502 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 CASQ2O14958 399 aaPredicted RBP13.15□□□□□ -0.3
COL9A1-210ENST00000493682 ARL6IP5O75915 188 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 JTBO76095 146 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 HSMCR30P0CW71 290 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 RRASP10301 218 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 CD81P60033 236 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 UBE2KP61086 200 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 MRPS15P82914 257 aaKnown RBP13.15□□□□□ -0.3
COL9A1-210ENST00000493682 RHOGP84095 191 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 TNXAQ16473 311 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 VMA21Q3ZAQ7 101 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 SRSF12Q8WXF0 261 aaKnown RBP13.15□□□□□ -0.3
COL9A1-210ENST00000493682 DDB2Q92466 427 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 FAM110AQ9BQ89 295 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 AKIP1Q9NQ31 210 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 ZNF230Q9UIE0 474 aaPredicted RBP13.15□□□□□ -0.3
COL9A1-210ENST00000493682 HYDINQ4G0P3 5121 aa13.15□□□□□ -0.3
COL9A1-210ENST00000493682 TMEM272A0A1B0GTI8 110 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 FAM223BA6NKX1 122 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 MPPED1O15442 326 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 AIREO43918 545 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 TPPPO94811 219 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 DIRAS3O95661 229 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 PRH1P02810 166 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 CALRP27797 417 aaKnown RBP13.14□□□□□ -0.31
COL9A1-210ENST00000493682 ZNF45Q02386 682 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 EXOSC2Q13868 293 aaKnown RBP13.14□□□□□ -0.31
COL9A1-210ENST00000493682 TRAM1Q15629 374 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 CD300EQ496F6 205 aaPredicted RBP13.14□□□□□ -0.31
COL9A1-210ENST00000493682 FAM223AQ8IWN6 122 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 LAX1Q8IWV1 398 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 MAFIPQ8WZ33 124 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 RAB3CQ96E17 227 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 NEURL2Q9BR09 285 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 SCN3BQ9NY72 215 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 NKX1-2Q9UD57 310 aaPredicted RBP13.14□□□□□ -0.31
COL9A1-210ENST00000493682 RAB22AQ9UL26 194 aa13.14□□□□□ -0.31
COL9A1-210ENST00000493682 RBM7Q9Y580 266 aaKnown RBP13.14□□□□□ -0.31
COL9A1-210ENST00000493682 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 CRYZL1O95825 349 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 DUTP33316 252 aaKnown RBP13.13□□□□□ -0.31
COL9A1-210ENST00000493682 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 HES5Q5TA89 166 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 ACOT12Q8WYK0 555 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 ADTRPQ96IZ2 230 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 SLC2A8Q9NY64 477 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 V9GY05 133 aa13.13□□□□□ -0.31
COL9A1-210ENST00000493682 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.12□□□□□ -0.31
COL9A1-210ENST00000493682 RBMY1BA6NDE4 496 aaKnown RBP13.12□□□□□ -0.31
COL9A1-210ENST00000493682 RBMY1EA6NEQ0 496 aaKnown RBP13.12□□□□□ -0.31
COL9A1-210ENST00000493682 LINC00473A8K010 186 aa13.12□□□□□ -0.31
COL9A1-210ENST00000493682 CD7P09564 240 aa13.12□□□□□ -0.31
COL9A1-210ENST00000493682 RBMY1DP0C7P1 496 aaKnown RBP13.12□□□□□ -0.31
COL9A1-210ENST00000493682 GNB3P16520 340 aa13.12□□□□□ -0.31
COL9A1-210ENST00000493682 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
COL9A1-210ENST00000493682 RANBP1P43487 201 aa13.12□□□□□ -0.31
COL9A1-210ENST00000493682 FABP5Q01469 135 aa13.12□□□□□ -0.31
COL9A1-210ENST00000493682 DEFB125Q8N687 156 aa13.12□□□□□ -0.31
COL9A1-210ENST00000493682 OSR1Q8TAX0 266 aaPredicted RBP13.12□□□□□ -0.31
COL9A1-210ENST00000493682 GINS4Q9BRT9 223 aa13.12□□□□□ -0.31
COL9A1-210ENST00000493682 ZNF430Q9H8G1 570 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms